Literature DB >> 30815082

Towards the Inference of Social and Behavioral Determinants of Sexual Health: Development of a Gold-Standard Corpus with Semi-Supervised Learning.

Daniel J Feller1, Jason Zucker1, Oliver Bear Don't Walk1, Bharat Srikishan1, Roxana Martinez1, Henry Evans1, Michael T Yin1, Peter Gordon1, Noémie Elhadad1.   

Abstract

Social and behavioral determinants of health (SBDH) are environmental and behavioral factors that are increasingly recognized for their impact on health outcomes. We describe ongoing research to extract SBDH related to sexual health from clinical documentation. Our work addresses several challenges. First, there is no standard set of SBDHs for sexual health; we describe our curation of 38 such SBDHs. Second, it is unknown how SBDH related to sexual health are expressed in clinical notes; we detail the characteristics of an annotated corpus. Third, SBDH documentations are rare; we describe the use of semi-supervised learning to accelerate the annotation process by identifying notes likely to document SBDH. Fourth, we describe preliminary results to infer an array of SBDH from clinical documentation using supervised learning.

Mesh:

Year:  2018        PMID: 30815082      PMCID: PMC6371339     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  23 in total

1.  Integrating Data On Social Determinants Of Health Into Electronic Health Records.

Authors:  Michael N Cantor; Lorna Thorpe
Journal:  Health Aff (Millwood)       Date:  2018-04       Impact factor: 6.301

2.  Developing Electronic Health Record (EHR) Strategies Related to Health Center Patients' Social Determinants of Health.

Authors:  Rachel Gold; Erika Cottrell; Arwen Bunce; Mary Middendorf; Celine Hollombe; Stuart Cowburn; Peter Mahr; Gerardo Melgar
Journal:  J Am Board Fam Med       Date:  2017 Jul-Aug       Impact factor: 2.657

3.  Classification of radiology reports for falls in an HIV study cohort.

Authors:  Jonathan Bates; Samah J Fodeh; Cynthia A Brandt; Julie A Womack
Journal:  J Am Med Inform Assoc       Date:  2015-11-13       Impact factor: 4.497

Review 4.  Food Insecurity And Health Outcomes.

Authors:  Craig Gundersen; James P Ziliak
Journal:  Health Aff (Millwood)       Date:  2015-11       Impact factor: 6.301

5.  Readmissions in HIV-Infected Inpatients: A Large Cohort Analysis.

Authors:  Daniel J Feller; Matthew J Akiyama; Peter Gordon; Bruce D Agins
Journal:  J Acquir Immune Defic Syndr       Date:  2016-04-01       Impact factor: 3.731

6.  Mining 100 million notes to find homelessness and adverse childhood experiences: 2 case studies of rare and severe social determinants of health in electronic health records.

Authors:  Cosmin A Bejan; John Angiolillo; Douglas Conway; Robertson Nash; Jana K Shirey-Rice; Loren Lipworth; Robert M Cronin; Jill Pulley; Sunil Kripalani; Shari Barkin; Kevin B Johnson; Joshua C Denny
Journal:  J Am Med Inform Assoc       Date:  2018-01-01       Impact factor: 4.497

7.  Modeling clinical context: rediscovering the social history and evaluating language from the clinic to the wards.

Authors:  Colin Walsh; Noémie Elhadad
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2014-04-07

8.  Optimizing the Use of Electronic Health Records to Identify High-Risk Psychosocial Determinants of Health.

Authors:  Nicolas Michel Oreskovic; Jennifer Maniates; Jeffrey Weilburg; Garry Choy
Journal:  JMIR Med Inform       Date:  2017-08-14

9.  Large-scale online semantic indexing of biomedical articles via an ensemble of multi-label classification models.

Authors:  Yannis Papanikolaou; Grigorios Tsoumakas; Manos Laliotis; Nikos Markantonatos; Ioannis Vlahavas
Journal:  J Biomed Semantics       Date:  2017-09-22

10.  Diagnosis code assignment: models and evaluation metrics.

Authors:  Adler Perotte; Rimma Pivovarov; Karthik Natarajan; Nicole Weiskopf; Frank Wood; Noémie Elhadad
Journal:  J Am Med Inform Assoc       Date:  2013-12-02       Impact factor: 4.497

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  8 in total

1.  Social determinants of health in electronic health records and their impact on analysis and risk prediction: A systematic review.

Authors:  Min Chen; Xuan Tan; Rema Padman
Journal:  J Am Med Inform Assoc       Date:  2020-11-01       Impact factor: 4.497

2.  Longitudinal analysis of social and behavioral determinants of health in the EHR: exploring the impact of patient trajectories and documentation practices.

Authors:  Daniel J Feller; Jason Zucker; Oliver Bear Don't Walk; Michael T Yin; Peter Gordon; Noémie Elhadad
Journal:  AMIA Annu Symp Proc       Date:  2020-03-04

3.  Detecting Social and Behavioral Determinants of Health with Structured and Free-Text Clinical Data.

Authors:  Daniel J Feller; Oliver J Bear Don't Walk Iv; Jason Zucker; Michael T Yin; Peter Gordon; Noémie Elhadad
Journal:  Appl Clin Inform       Date:  2020-03-04       Impact factor: 2.342

4.  Am I Positive? Improving Human Immunodeficiency Virus Testing in the Era of Preexposure Prophylaxis and Immediate Antiretroviral Therapy Using Machine Learning.

Authors:  Jason Zucker; Caroline Carnevale; Peter Gordon; Magdalena E Sobieszczyk; Alex J Rai
Journal:  Open Forum Infect Dis       Date:  2022-05-18       Impact factor: 4.423

5.  Women Are Less Likely to Be Tested for HIV or Offered Preexposure Prophylaxis at the Time of Sexually Transmitted Infection Diagnosis.

Authors:  Caitlin Yumori; Jason Zucker; Deborah Theodore; Michelle Chang; Caroline Carnevale; Jacek Slowikowski; Elijah LaSota; Susan Olender; Peter Gordon; Alwyn Cohall; Magdalena E Sobieszczyk
Journal:  Sex Transm Dis       Date:  2021-01       Impact factor: 2.830

6.  Annotating social determinants of health using active learning, and characterizing determinants using neural event extraction.

Authors:  Kevin Lybarger; Mari Ostendorf; Meliha Yetisgen
Journal:  J Biomed Inform       Date:  2020-12-05       Impact factor: 6.317

7.  Stigma, biomarkers, and algorithmic bias: recommendations for precision behavioral health with artificial intelligence.

Authors:  Colin G Walsh; Beenish Chaudhry; Prerna Dua; Kenneth W Goodman; Bonnie Kaplan; Ramakanth Kavuluru; Anthony Solomonides; Vignesh Subbian
Journal:  JAMIA Open       Date:  2020-01-22

8.  Extracting social determinants of health from electronic health records using natural language processing: a systematic review.

Authors:  Braja G Patra; Mohit M Sharma; Veer Vekaria; Prakash Adekkanattu; Olga V Patterson; Benjamin Glicksberg; Lauren A Lepow; Euijung Ryu; Joanna M Biernacka; Al'ona Furmanchuk; Thomas J George; William Hogan; Yonghui Wu; Xi Yang; Jiang Bian; Myrna Weissman; Priya Wickramaratne; J John Mann; Mark Olfson; Thomas R Campion; Mark Weiner; Jyotishman Pathak
Journal:  J Am Med Inform Assoc       Date:  2021-11-25       Impact factor: 7.942

  8 in total

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