Literature DB >> 30806126

Identification of reliable reference genes for quantitative real-time PCR in ovary and uterus of laying hens under heat stress.

Hossein Hassanpour1,2, Zahra Aghajani1, Shahab Bahadoran3, Navid Farhadi1, Hasan Nazari2, Waranyoo Kaewduangta4.   

Abstract

The main stage in real-time quantitative PCR is a quantification of gene transcriptomes, in which suitable use of reliable reference genes is critical to normalize accurately. To determine the most stable reference genes in laying hens under heat stress, from a panel of nine typical candidate reference genes, the mRNA transcript of ACTB, HMBS, HPRT1, RPL13, RPL32, 18SrRNA, TBP, TFRC, and YWHAZ was evaluated in the ovary and uterus of both control and heat-stress groups of laying hens. Forty 23-week-old White Leghorn laying hens were housed in two rooms. The control (n = 20) and heat-stress (n = 20) groups were maintained at 21-23 °C and 36-38 °C for 8 weeks respectively. Analysis of this set of genes was done with BestKeeper, geNorm, and NormFinder software programs to find the most stable ones. Candidate reference genes ranked in the uterus of heat-stress and control groups of hens included YWHAZ, HPRT1, HMBS, RPL13, TFRC, ACTB, TBP, RPL32, and 18SrRNA; those in the ovary were YWHAZ, HPRT1, TFRC, HMBS, RPL13, TBP, RPL32, ACTB, and 18SrRNA. The overall results indicated that the most stable genes are YWHAZ, HPRT1, HMBS, RPL13, TFRC, TBP, ACTB, RPL32, and 18SrRNA respectively. In addition, the combination of YWHAZ, HPRT1, and HMBS is suggested as the most stable reference group of genes for more accurate quantitative data normalization in the ovarian and uterine tissues of laying hens under control and heat stress conditions. Lay summary Heat stress influences the expression of many genes in the reproductive tissues of birds. Accurate evaluation of these changes via real-time quantitative PCR depends on the determination of reliable reference genes. In this study, nine candidate housekeeping genes were evaluated, and the most stable were YWHAZ, HPRT1, HMBS, RPL13, TFRC, TBP, ACTB, RPL32, and 18SrRNA.

Entities:  

Keywords:  Gene expression; heat stress; laying hen; ovary; reference gene; uterus

Mesh:

Substances:

Year:  2019        PMID: 30806126     DOI: 10.1080/10253890.2019.1574294

Source DB:  PubMed          Journal:  Stress        ISSN: 1025-3890            Impact factor:   3.493


  5 in total

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Authors:  Fabiana Cristina Belchior de Sousa; Carlos Souza do Nascimento; Maíse Dos Santos Macário; Renan Dos Santos Araújo; Leandro Teixeira Barbosa; Geraldo Fábio Viana Bayão; Katiene Régia Silva Sousa
Journal:  Mol Biol Rep       Date:  2021-01-17       Impact factor: 2.316

2.  Screening of Reference Genes for RT-qPCR in Chicken Adipose Tissue and Adipocytes.

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Journal:  Front Physiol       Date:  2021-05-14       Impact factor: 4.566

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4.  Investigation of chicken housekeeping genes using next-generation sequencing data.

Authors:  Karim Hasanpur; Sevda Hosseinzadeh; Atiye Mirzaaghayi; Sadegh Alijani
Journal:  Front Genet       Date:  2022-09-13       Impact factor: 4.772

5.  Identification of reliable reference genes for expression studies in the magnum of laying hens housed in cage and cage-free systems.

Authors:  Roy Rodríguez-Hernández; Edgar O Oviedo-Rondón; Iang S Rondón-Barragán
Journal:  Vet Med Sci       Date:  2021-05-20
  5 in total

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