Literature DB >> 30804207

Self-organized dynamics and the transition to turbulence of confined active nematics.

Achini Opathalage1, Michael M Norton1, Michael P N Juniper1, Blake Langeslay1, S Ali Aghvami1, Seth Fraden2, Zvonimir Dogic2,3.   

Abstract

We study how confinement transforms the chaotic dynamics of bulk microtubule-based active nematics into regular spatiotemporal patterns. For weak confinements in disks, multiple continuously nucleating and annihilating topological defects self-organize into persistent circular flows of either handedness. Increasing confinement strength leads to the emergence of distinct dynamics, in which the slow periodic nucleation of topological defects at the boundary is superimposed onto a fast procession of a pair of defects. A defect pair migrates toward the confinement core over multiple rotation cycles, while the associated nematic director field evolves from a distinct double spiral toward a nearly circularly symmetric configuration. The collapse of the defect orbits is punctuated by another boundary-localized nucleation event, that sets up long-term doubly periodic dynamics. Comparing experimental data to a theoretical model of an active nematic reveals that theory captures the fast procession of a pair of [Formula: see text] defects, but not the slow spiral transformation nor the periodic nucleation of defect pairs. Theory also fails to predict the emergence of circular flows in the weak confinement regime. The developed confinement methods are generalized to more complex geometries, providing a robust microfluidic platform for rationally engineering 2D autonomous flows.

Keywords:  active matter; liquid crystals; pattern formation; self-organization; topological defects

Year:  2019        PMID: 30804207      PMCID: PMC6421422          DOI: 10.1073/pnas.1816733116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  13 in total

1.  Tunable corrugated patterns in an active nematic sheet.

Authors:  Anis Senoussi; Shunnichi Kashida; Raphael Voituriez; Jean-Christophe Galas; Ananyo Maitra; André Estevez-Torres
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-14       Impact factor: 11.205

2.  Submersed micropatterned structures control active nematic flow, topology, and concentration.

Authors:  Kristian Thijssen; Dimitrius A Khaladj; S Ali Aghvami; Mohamed Amine Gharbi; Seth Fraden; Julia M Yeomans; Linda S Hirst; Tyler N Shendruk
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-21       Impact factor: 11.205

3.  Active liquid crystals powered by force-sensing DNA-motor clusters.

Authors:  Alexandra M Tayar; Michael F Hagan; Zvonimir Dogic
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-27       Impact factor: 11.205

4.  Spatiotemporal control of liquid crystal structure and dynamics through activity patterning.

Authors:  Rui Zhang; Steven A Redford; Paul V Ruijgrok; Nitin Kumar; Ali Mozaffari; Sasha Zemsky; Aaron R Dinner; Vincenzo Vitelli; Zev Bryant; Margaret L Gardel; Juan J de Pablo
Journal:  Nat Mater       Date:  2021-02-18       Impact factor: 47.656

5.  Emergence of active nematics in chaining bacterial biofilms.

Authors:  Yusuf Ilker Yaman; Esin Demir; Roman Vetter; Askin Kocabas
Journal:  Nat Commun       Date:  2019-05-23       Impact factor: 14.919

6.  Integer topological defects organize stresses driving tissue morphogenesis.

Authors:  Pau Guillamat; Carles Blanch-Mercader; Guillaume Pernollet; Karsten Kruse; Aurélien Roux
Journal:  Nat Mater       Date:  2022-02-10       Impact factor: 47.656

7.  Logic operations with active topological defects.

Authors:  Rui Zhang; Ali Mozaffari; Juan J de Pablo
Journal:  Sci Adv       Date:  2022-02-23       Impact factor: 14.136

8.  Flow coupling between active and passive fluids across water-oil interfaces.

Authors:  Yen-Chen Chen; Brock Jolicoeur; Chih-Che Chueh; Kun-Ta Wu
Journal:  Sci Rep       Date:  2021-07-07       Impact factor: 4.379

9.  Wrinkling Instability in 3D Active Nematics.

Authors:  Tobias Strübing; Amir Khosravanizadeh; Andrej Vilfan; Eberhard Bodenschatz; Ramin Golestanian; Isabella Guido
Journal:  Nano Lett       Date:  2020-08-19       Impact factor: 11.189

10.  Explicit calculation method for cell alignment in non-circular geometries.

Authors:  Hiroki Miyazako; Takaaki Nara
Journal:  R Soc Open Sci       Date:  2022-01-19       Impact factor: 2.963

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