Literature DB >> 30802330

Changing expression profiles of mRNA, lncRNA, circRNA, and miRNA in lung tissue reveal the pathophysiological of bronchopulmonary dysplasia (BPD) in mouse model.

Juan Wang1,2, Jing Yin1, Xingyun Wang1, Heng Liu1, Yin Hu1, Xiangyun Yan1, Bin Zhuang1, Zhangbin Yu1, Shuping Han1.   

Abstract

New perinatal care technologies have improved the survival rate of preterm neonates, but the prevalence of bronchopulmonary dysplasia (BPD), one of the most intractable problems in neonatal intensive care unit (NICU), remains unchanged. In present study, high-throughput sequencing (HTS) was performed to detect the expression profiles of long noncoding RNAs (lncRNAs), messenger RNAs (mRNAs), circular RNAs (circRNAs), and microRNAs (miRNAs) in hyperoxia-induced BPD mouse model. Significant differentially expressed RNAs were selected and clustered between the BPD group and the control group. The results revealed that expressions of 1778 lncRNAs, 1240 mRNAs, 97 circRNAs, and 201 miRNAs were significantly altered in the BPD group. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were performed to predict the potential functions of differentially expressed RNAs. lncRNA-mRNA and circRNA-miRNA coexpression networks were constructed to detect their association with the pathogenesis of BPD. Our study provides a systematic perspective on the potential function of RNAs during BPD.
© 2019 Wiley Periodicals, Inc.

Entities:  

Keywords:  bronchopulmonary dysplasia; circRNA; lncRNA; mRNA; miRNA

Year:  2019        PMID: 30802330     DOI: 10.1002/jcb.28212

Source DB:  PubMed          Journal:  J Cell Biochem        ISSN: 0730-2312            Impact factor:   4.429


  16 in total

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Journal:  Life (Basel)       Date:  2022-03-30

2.  Long non-coding RNA Rian protects against experimental bronchopulmonary dysplasia by sponging miR-421.

Authors:  Xifeng Tao; Yafei Fang; Chen Huo
Journal:  Exp Ther Med       Date:  2021-05-19       Impact factor: 2.447

3.  Circ-IGF1R inhibits cell invasion and migration in non-small cell lung cancer.

Authors:  Zhanyu Xu; Weiwei Xiang; Wenjie Chen; Yu Sun; Fanglu Qin; Jiangbo Wei; Liqiang Yuan; Liping Zheng; Shikang Li
Journal:  Thorac Cancer       Date:  2020-02-27       Impact factor: 3.500

4.  Identification and analysis of long non-coding RNAs that are involved in inflammatory process in response to transmissible gastroenteritis virus infection.

Authors:  Xuelian Ma; Xiaomin Zhao; Kaili Wang; Xiaoyi Tang; Jianxiong Guo; Mi Mi; Yanping Qi; Lingling Chang; Yong Huang; Dewen Tong
Journal:  BMC Genomics       Date:  2019-11-04       Impact factor: 3.969

5.  Silencing of Long Non-Coding RNA X Inactive Specific Transcript (Xist) Contributes to Suppression of Bronchopulmonary Dysplasia Induced by Hyperoxia in Newborn Mice via microRNA-101-3p and the transforming growth factor-beta 1 (TGF-β1)/Smad3 Axis.

Authors:  Wenhao Yuan; Xiaoyan Liu; Lingkong Zeng; Hanchu Liu; Baohuan Cai; Yanping Huang; Xuwei Tao; Luxia Mo; Lingxia Zhao; Chunfang Gao
Journal:  Med Sci Monit       Date:  2020-10-18

6.  Changing Expression Profiles of Messenger RNA, MicroRNA, Long Non-coding RNA, and Circular RNA Reveal the Key Regulators and Interaction Networks of Competing Endogenous RNA in Pulmonary Fibrosis.

Authors:  Xue Liu; Huaman Liu; Xinhua Jia; Rong He; Xinyue Zhang; Wei Zhang
Journal:  Front Genet       Date:  2020-09-24       Impact factor: 4.599

7.  lncRNAS56464.1 as a ceRNA promotes the proliferation of fibroblast‑like synoviocytes in experimental arthritis via the Wnt signaling pathway and sponges miR‑152‑3p.

Authors:  Hui Jiang; Jian Liu; Chang Fan; Jing Wang; Weiping Li
Journal:  Int J Mol Med       Date:  2021-01-15       Impact factor: 4.101

8.  Comprehensive Analysis of Differentially Expressed lncRNA, circRNA and mRNA and Their ceRNA Networks in Mice With Severe Acute Pancreatitis.

Authors:  Bing Wang; Jun Wu; Qilin Huang; Xiaohui Yuan; Yi Yang; Wen Jiang; Yi Wen; Lijun Tang; Hongyu Sun
Journal:  Front Genet       Date:  2021-01-28       Impact factor: 4.599

9.  Long non-coding RNA MALAT1 targeting STING transcription promotes bronchopulmonary dysplasia through regulation of CREB.

Authors:  Jia-He Chen; Dan-Dan Feng; Yu-Fei Chen; Cai-Xia Yang; Chen-Xia Juan; Qian Cao; Xi Chen; Shuang Liu; Guo-Ping Zhou
Journal:  J Cell Mol Med       Date:  2020-08-18       Impact factor: 5.310

10.  Long Non-coding RNA TUG1 Modulates Expression of Elastin to Relieve Bronchopulmonary Dysplasia via Sponging miR-29a-3p.

Authors:  Qinghua Zhong; Li Wang; Zhiye Qi; Jia Cao; Kun Liang; Caiying Zhang; Jiang Duan
Journal:  Front Pediatr       Date:  2020-10-30       Impact factor: 3.418

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