Literature DB >> 30798043

Development of an interspecies interaction model: An experiment on Clostridium cadaveris and Clostridium sporogenes under anaerobic condition.

Taewoan Koo1, Joonyeob Lee1, Seokhwan Hwang2.   

Abstract

The specific primer and probe sets for quantifying Clostridium cadaveris and Clostridium sporogenes using a quantitative real-time PCR were designed. Each primer and probe set detected only the target species very specifically. The two species were cultivated in pure and mixed culture in batch mode with glucose as the only carbon source. The designed QPCR sets were used successfully to estimate the biokinetic parameters of each species in pure culture: i.e., maximum specific growth rate μmax, half saturation concentration Ks, growth yield Y, and decay coefficient Kd. of C. cadaveris and C. sporogenes were 0.311 ± 0.020 and 0.360 ± 0.019 h-1, 4.241 ± 1.653 and 5.171 ± 1.097 g/L, 0.301 ± 0.065 and 0.199 ± 0.037 1011 copies/g, 0.005 ± 0.043 and 0.009 ± 0.025 h-1, respectively. The effect of interspecific interaction of on substrate consumption rate and microbial growth was evaluated using mixed culture; curve fitting and comparison of coefficients detected increase in substrate consumption rate but decrease in microbial growth rate; these results imply interspecific interaction effect. A new model was of the interspecific interaction was developed, with focus on accuracy, realism, simplicity and biological significance. This interspecific interaction model may be extended to more-complex bioprocesses such as biological wastewater treatment systems and anaerobic digestion.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Biokinetic analysis; Clostridium cadaveris; Clostridium sporogenes; Interspecific interaction model development; Primer and probe set; Quantitative real-time PCR

Mesh:

Substances:

Year:  2019        PMID: 30798043     DOI: 10.1016/j.jenvman.2019.02.084

Source DB:  PubMed          Journal:  J Environ Manage        ISSN: 0301-4797            Impact factor:   6.789


  5 in total

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