Literature DB >> 30797054

The presence of trace components significantly broadens the molecular response of Aspergillus niger to guar gum.

Nancy Coconi Linares1, Marcos Di Falco2, Isabelle Benoit-Gelber3, Birgit S Gruben4, Mao Peng1, Adrian Tsang2, Miia R Mäkelä5, Ronald P de Vries6.   

Abstract

Guar gum consists mainly of galactomannan and constitutes the endosperm of guar seeds that acts as a reserve polysaccharide for germination. Due to its molecular structure and physical properties, this biopolymer has been considered as one of the most important and widely used gums in industry. However, for many of these applications this (hemi-)cellulosic structure needs to be modified or (partially) depolymerized in order to customize and improve its physicochemical properties. In this study, transcriptome, exoproteome and enzyme activity analyses were employed to decipher the complete enzymatic arsenal for guar gum depolymerization by Aspergillus niger. This multi-omic analysis revealed a set of 46 genes encoding carbohydrate-active enzymes (CAZymes) responding to the presence of guar gum, including CAZymes not only with preferred activity towards galactomannan, but also towards (arabino-)xylan, cellulose, starch and pectin, likely due to trace components in guar gum. This demonstrates that the purity of substrates has a strong effect on the resulting enzyme mixture produced by A. niger and probably by other fungi as well, which has significant implications for the commercial production of fungal enzyme cocktails. Crown
Copyright © 2019. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Aspergillus niger; CAZymes; Exoproteome; Guar gum; Plant biomass degradation; Transcriptome

Mesh:

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Year:  2019        PMID: 30797054     DOI: 10.1016/j.nbt.2019.02.005

Source DB:  PubMed          Journal:  N Biotechnol        ISSN: 1871-6784            Impact factor:   5.079


  3 in total

1.  The Cultivation Method Affects the Transcriptomic Response of Aspergillus niger to Growth on Sugar Beet Pulp.

Authors:  Sandra Garrigues; Roland S Kun; Mao Peng; Birgit S Gruben; Isabelle Benoit Gelber; Miia Mäkelä; Ronald P de Vries
Journal:  Microbiol Spectr       Date:  2021-08-25

2.  Cistanche deserticola polysaccharide induces melanogenesis in melanocytes and reduces oxidative stress via activating NRF2/HO-1 pathway.

Authors:  Yibo Hu; Jinhua Huang; Yixiao Li; Ling Jiang; Yujie Ouyang; Yumeng Li; Lun Yang; Xiaojiao Zhao; Lihua Huang; Hong Xiang; Jing Chen; Qinghai Zeng
Journal:  J Cell Mol Med       Date:  2020-02-25       Impact factor: 5.310

3.  Machine learning prediction of novel pectinolytic enzymes in Aspergillus niger through integrating heterogeneous (post-) genomics data.

Authors:  Mao Peng; Ronald P de Vries
Journal:  Microb Genom       Date:  2021-12
  3 in total

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