Literature DB >> 30794378

Hydrophilic Nanocomposite Functionalized by Carrageenan for the Specific Enrichment of Glycopeptides.

Yingxin Chen, Qianying Sheng, Yayun Hong, Minbo Lan.   

Abstract

A hydrophilic nanocomposite was synthesized by an easy route to improve glycopeptides enrichment efficiency. This new composite, prepared with a method based on electrostatic interaction, was demonstrated to be efficient for immobilization of carrageenan on graphene oxide/poly(ethylenimine) support (denoted as GO-PEI-Carr). Carrageenan, which has a large number of hydroxyl groups and is fully negatively charged, is a new modified phase of hydrophilic materials in glycoproteomics. The introduction of carrageenan provided the composite not only a perfect surface charge but also a greater ability to enrich glycosylated peptides. Thirty-four glycopeptides from human serum immunoglobulin G (IgG) tryptic digests were obviously observed with greatly improved signal-to-noise (S/N) ratio. A good selectivity was still kept even when the molar ratio of IgG and bovine serum albumin (BSA) tryptic digest mixtures reached to 1:500. Meanwhile, 76 glycopeptides derived from 56 glycoproteins with 83 N-glycosylation sites were identified from human serum and 149 glycopeptides derived from 129 glycoproteins with 157 N-glycosylation sites were identified from mouse liver tissues, which showed the ability to enrich glycopeptides from complex biological samples. In addition, GO-PEI-Carr exhibited a unique repeatability and stability even after enrichment of glycopeptides for 20 times. It also performed a higher sensitivity (1 fmol/μL IgG), a better enrichment capacity (up to ∼300 mg/g), and an ideal enrichment recovery (90.8% and 109.5%) for glycopeptides enrichment, indicating a great potential for the application of glycoproteomic research.

Entities:  

Year:  2019        PMID: 30794378     DOI: 10.1021/acs.analchem.8b05578

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  6 in total

1.  A novel graphene oxide/chitosan foam incorporated with metal-organic framework stationary phase for simultaneous enrichment of glycopeptide and phosphopeptide with high efficiency.

Authors:  Rong Liu; Wenqing Gao; Jiaqian Yang; Shun Zhang; Chenlu Wang; Jing Lin; Sijia Zhang; Jiancheng Yu; Keqi Tang
Journal:  Anal Bioanal Chem       Date:  2022-01-06       Impact factor: 4.142

2.  Mass Spectrometry-Based Methods for Immunoglobulin G N-Glycosylation Analysis.

Authors:  Siniša Habazin; Jerko Štambuk; Jelena Šimunović; Toma Keser; Genadij Razdorov; Mislav Novokmet
Journal:  Exp Suppl       Date:  2021

3.  In-depth characterization and comparison of the N-glycosylated proteome of two-dimensional- and three-dimensional-cultured breast cancer cells and xenografted tumors.

Authors:  Yonghong Mao; Yang Zhao; Yong Zhang; Hao Yang
Journal:  PLoS One       Date:  2020-12-10       Impact factor: 3.240

4.  Comparative N-Glycoproteomics Analysis of Clinical Samples Via Different Mass Spectrometry Dissociation Methods.

Authors:  Wenjuan Zeng; Shanshan Zheng; Tao Su; Jiahan Cheng; Yonghong Mao; Yi Zhong; Yueqiu Liu; Jianhai Chen; Wanjun Zhao; Tianhai Lin; Fang Liu; Guisen Li; Hao Yang; Yong Zhang
Journal:  Front Chem       Date:  2022-02-24       Impact factor: 5.221

5.  Comprehensive Plasma N-Glycoproteome Profiling Based on EThcD-sceHCD-MS/MS.

Authors:  Yonghong Mao; Tao Su; Tianhai Lin; Hao Yang; Yang Zhao; Yong Zhang; Xinhua Dai
Journal:  Front Chem       Date:  2022-06-20       Impact factor: 5.545

6.  [Covalent organic framework functional materials and their applications in glycopeptide enrichment].

Authors:  Qianying Sheng; Yang Zhou; Zhiquan Zhao; Yaohui Wang; Weicheng Li; Yanxiong Ke; Minbo Lan; Guangyan Qing; Xinmiao Liang
Journal:  Se Pu       Date:  2021-06
  6 in total

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