Literature DB >> 30791200

Application and future perspective of CRISPR/Cas9 genome editing in fruit crops.

Junhui Zhou1, Dongdong Li1,2, Guoming Wang1,3, Fuxi Wang1, Merixia Kunjal1, Dirk Joldersma1, Zhongchi Liu1.   

Abstract

Fruit crops, including apple, orange, grape, banana, strawberry, watermelon, kiwifruit and tomato, not only provide essential nutrients for human life but also contribute to the major agricultural output and economic growth of many countries and regions in the world. Recent advancements in genome editing provides an unprecedented opportunity for the genetic improvement of these agronomically important fruit crops. Here, we summarize recent reports of applying CRISPR/Cas9 to fruit crops, including efforts to reduce disease susceptibility, change plant architecture or flower morphology, improve fruit quality traits, and increase fruit yield. We discuss challenges facing fruit crops as well as new improvements and platforms that could be used to facilitate genome editing in fruit crops, including dCas9-base-editing to introduce desirable alleles and heat treatment to increase editing efficiency. In addition, we highlight what we see as potentially revolutionary development ranging from transgene-free genome editing to de novo domestication of wild relatives. Without doubt, we now see only the beginning of what will eventually be possible with the use of the CRISPR/Cas9 toolkit. Efforts to communicate with the public and an emphasis on the manipulation of consumer-friendly traits will be critical to facilitate public acceptance of genetically engineered fruits with this new technology.
© 2019 Institute of Botany, Chinese Academy of Sciences.

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Year:  2019        PMID: 30791200      PMCID: PMC6703982          DOI: 10.1111/jipb.12793

Source DB:  PubMed          Journal:  J Integr Plant Biol        ISSN: 1672-9072            Impact factor:   7.061


  121 in total

1.  The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.

Authors:  Olivier Jaillon; Jean-Marc Aury; Benjamin Noel; Alberto Policriti; Christian Clepet; Alberto Casagrande; Nathalie Choisne; Sébastien Aubourg; Nicola Vitulo; Claire Jubin; Alessandro Vezzi; Fabrice Legeai; Philippe Hugueney; Corinne Dasilva; David Horner; Erica Mica; Delphine Jublot; Julie Poulain; Clémence Bruyère; Alain Billault; Béatrice Segurens; Michel Gouyvenoux; Edgardo Ugarte; Federica Cattonaro; Véronique Anthouard; Virginie Vico; Cristian Del Fabbro; Michaël Alaux; Gabriele Di Gaspero; Vincent Dumas; Nicoletta Felice; Sophie Paillard; Irena Juman; Marco Moroldo; Simone Scalabrin; Aurélie Canaguier; Isabelle Le Clainche; Giorgio Malacrida; Eléonore Durand; Graziano Pesole; Valérie Laucou; Philippe Chatelet; Didier Merdinoglu; Massimo Delledonne; Mario Pezzotti; Alain Lecharny; Claude Scarpelli; François Artiguenave; M Enrico Pè; Giorgio Valle; Michele Morgante; Michel Caboche; Anne-Françoise Adam-Blondon; Jean Weissenbach; Francis Quétier; Patrick Wincker
Journal:  Nature       Date:  2007-08-26       Impact factor: 49.962

2.  Mre11: roles in DNA repair beyond homologous recombination.

Authors:  Shan Zha; Cristian Boboila; Frederick W Alt
Journal:  Nat Struct Mol Biol       Date:  2009-08       Impact factor: 15.369

3.  Fluorescence Marker-Assisted Isolation of Cas9-Free and CRISPR-Edited Arabidopsis Plants.

Authors:  Hanchuanzhi Yu; Yunde Zhao
Journal:  Methods Mol Biol       Date:  2019

4.  De novo domestication of wild tomato using genome editing.

Authors:  Agustin Zsögön; Tomáš Čermák; Emmanuel Rezende Naves; Marcela Morato Notini; Kai H Edel; Stefan Weinl; Luciano Freschi; Daniel F Voytas; Jörg Kudla; Lázaro Eustáquio Pereira Peres
Journal:  Nat Biotechnol       Date:  2018-10-01       Impact factor: 54.908

5.  DNA-Free Genetically Edited Grapevine and Apple Protoplast Using CRISPR/Cas9 Ribonucleoproteins.

Authors:  Mickael Malnoy; Roberto Viola; Min-Hee Jung; Ok-Jae Koo; Seokjoong Kim; Jin-Soo Kim; Riccardo Velasco; Chidananda Nagamangala Kanchiswamy
Journal:  Front Plant Sci       Date:  2016-12-20       Impact factor: 5.753

6.  Rapid breeding of parthenocarpic tomato plants using CRISPR/Cas9.

Authors:  Risa Ueta; Chihiro Abe; Takahito Watanabe; Shigeo S Sugano; Ryosuke Ishihara; Hiroshi Ezura; Yuriko Osakabe; Keishi Osakabe
Journal:  Sci Rep       Date:  2017-03-30       Impact factor: 4.379

7.  Genome editing of the disease susceptibility gene CsLOB1 in citrus confers resistance to citrus canker.

Authors:  Hongge Jia; Yunzeng Zhang; Vladimir Orbović; Jin Xu; Frank F White; Jeffrey B Jones; Nian Wang
Journal:  Plant Biotechnol J       Date:  2017-01-04       Impact factor: 9.803

8.  A method for the production and expedient screening of CRISPR/Cas9-mediated non-transgenic mutant plants.

Authors:  Longzheng Chen; Wei Li; Lorenzo Katin-Grazzini; Jing Ding; Xianbin Gu; Yanjun Li; Tingting Gu; Ren Wang; Xinchun Lin; Ziniu Deng; Richard J McAvoy; Frederick G Gmitter; Zhanao Deng; Yunde Zhao; Yi Li
Journal:  Hortic Res       Date:  2018-03-02       Impact factor: 6.793

9.  High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects.

Authors:  Benjamin P Kleinstiver; Vikram Pattanayak; Michelle S Prew; Shengdar Q Tsai; Nhu T Nguyen; Zongli Zheng; J Keith Joung
Journal:  Nature       Date:  2016-01-06       Impact factor: 49.962

10.  High-frequency, precise modification of the tomato genome.

Authors:  Tomáš Čermák; Nicholas J Baltes; Radim Čegan; Yong Zhang; Daniel F Voytas
Journal:  Genome Biol       Date:  2015-11-06       Impact factor: 13.583

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  14 in total

1.  CRISPR-Act3.0 for highly efficient multiplexed gene activation in plants.

Authors:  Changtian Pan; Xincheng Wu; Kasey Markel; Aimee A Malzahn; Neil Kundagrami; Simon Sretenovic; Yingxiao Zhang; Yanhao Cheng; Patrick M Shih; Yiping Qi
Journal:  Nat Plants       Date:  2021-06-24       Impact factor: 15.793

Review 2.  Drought tolerance improvement in Solanum lycopersicum: an insight into "OMICS" approaches and genome editing.

Authors:  Sima Taheri; Saikat Gantait; Parisa Azizi; Purabi Mazumdar
Journal:  3 Biotech       Date:  2022-02-08       Impact factor: 2.406

3.  Roles of abscisic acid in regulating ripening and quality of strawberry, a model non-climacteric fruit.

Authors:  Bai-Jun Li; Donald Grierson; Yanna Shi; Kun-Song Chen
Journal:  Hortic Res       Date:  2022-04-22       Impact factor: 7.291

4.  Highly efficient CRISPR systems for loss-of-function and gain-of-function research in pear calli.

Authors:  Meiling Ming; Hongjun Long; Zhicheng Ye; Changtian Pan; Jiali Chen; Rong Tian; Congrui Sun; Yongsong Xue; Yingxiao Zhang; Jiaming Li; Yiping Qi; Jun Wu
Journal:  Hortic Res       Date:  2022-06-30       Impact factor: 7.291

Review 5.  Genome-editing approaches and applications: a brief review on CRISPR technology and its role in cancer.

Authors:  Narmadhaa Siva; Sonal Gupta; Ayam Gupta; Jayendra Nath Shukla; Babita Malik; Nidhi Shukla
Journal:  3 Biotech       Date:  2021-02-26       Impact factor: 2.406

6.  Characterization of FLOWERING LOCUS C Homologs in Apple as a Model for Fruit Trees.

Authors:  Hidenao Kagaya; Naoko Ito; Tomoki Shibuya; Sadao Komori; Kazuhisa Kato; Yoshinori Kanayama
Journal:  Int J Mol Sci       Date:  2020-06-26       Impact factor: 5.923

7.  New Strategies to Overcome Present CRISPR/Cas9 Limitations in Apple and Pear: Efficient Dechimerization and Base Editing.

Authors:  Jaiana Malabarba; Elisabeth Chevreau; Nicolas Dousset; Florian Veillet; Julie Moizan; Emilie Vergne
Journal:  Int J Mol Sci       Date:  2020-12-30       Impact factor: 5.923

Review 8.  Transgenic and genome-edited fruits: background, constraints, benefits, and commercial opportunities.

Authors:  Maria Lobato-Gómez; Seanna Hewitt; Teresa Capell; Paul Christou; Amit Dhingra; Patricia Sarai Girón-Calva
Journal:  Hortic Res       Date:  2021-07-17       Impact factor: 7.291

Review 9.  A Revolution toward Gene-Editing Technology and Its Application to Crop Improvement.

Authors:  Sunny Ahmar; Sumbul Saeed; Muhammad Hafeez Ullah Khan; Shahid Ullah Khan; Freddy Mora-Poblete; Muhammad Kamran; Aroosha Faheem; Ambreen Maqsood; Muhammad Rauf; Saba Saleem; Woo-Jong Hong; Ki-Hong Jung
Journal:  Int J Mol Sci       Date:  2020-08-07       Impact factor: 5.923

Review 10.  Perspectives of CRISPR/Cas-mediated cis-engineering in horticulture: unlocking the neglected potential for crop improvement.

Authors:  Qiang Li; Manoj Sapkota; Esther van der Knaap
Journal:  Hortic Res       Date:  2020-03-15       Impact factor: 6.793

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