Literature DB >> 30790760

Environmental DNA provides information on sediment sources: A study in catchments affected by Fukushima radioactive fallout.

Olivier Evrard1, J Patrick Laceby2, Gentile Francesco Ficetola3, Ludovic Gielly4, Sylvain Huon5, Irène Lefèvre6, Yuichi Onda7, Jérôme Poulenard8.   

Abstract

An excessive supply of sediment is observed in numerous rivers across the world where it leads to deleterious impacts. Information on the sources delivering this material to waterbodies is required to design effective management measures, and sediment tracing or fingerprinting techniques are increasingly used to quantify the amount of sediment derived from different sources. However, the current methods used to identify the land use contributions to sediment have a limited discrimination power. Here, we investigated the potential of environmental DNA (eDNA) to provide more detailed information on the plant species found in sediment source areas as a next generation fingerprint. To this end, flood sediment deposits (n = 12) were collected in 2017 in two catchments impacted by the Fukushima radioactive fallout along differing river sections draining forests, cropland or a mix of both land uses. Conventional fingerprints (i.e. fallout radionuclides and organic matter properties) were also measured in these samples. The conventional fingerprint model results showed that most sediment samples contained a dominant proportion of subsoil material. Nevertheless, the eDNA information effectively discriminated the three above-mentioned groups of sediment, with the dominance of tree, shrub and fern species in sediment sampled in rivers draining forests versus a majority of grass, algae and cultivated plant species in sediment collected in rivers draining cropland. Based on these encouraging results, future research should examine the potential of eDNA in mixed land use catchments where the contribution of topsoil to sediment dominates and where the cultivation of land has not been abandoned in order to better characterize the memory effect of eDNA in soils and sediment.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Ancient plant DNA (aDNA); Catchment; FDNPP accident; Sediment fingerprinting; Sediment source

Mesh:

Substances:

Year:  2019        PMID: 30790760     DOI: 10.1016/j.scitotenv.2019.02.191

Source DB:  PubMed          Journal:  Sci Total Environ        ISSN: 0048-9697            Impact factor:   7.963


  4 in total

1.  New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality.

Authors:  C Giguet-Covex; G F Ficetola; K Walsh; J Poulenard; M Bajard; L Fouinat; P Sabatier; L Gielly; E Messager; A L Develle; F David; P Taberlet; E Brisset; F Guiter; R Sinet; F Arnaud
Journal:  Sci Rep       Date:  2019-10-11       Impact factor: 4.379

2.  Sediment source fingerprinting: benchmarking recent outputs, remaining challenges and emerging themes.

Authors:  Adrian L Collins; Martin Blackwell; Pascal Boeckx; Charlotte-Anne Chivers; Monica Emelko; Olivier Evrard; Ian Foster; Allen Gellis; Hamid Gholami; Steve Granger; Paul Harris; Arthur J Horowitz; J Patrick Laceby; Nuria Martinez-Carreras; Jean Minella; Lisa Mol; Kazem Nosrati; Simon Pulley; Uldis Silins; Yuri Jacques da Silva; Micheal Stone; Tales Tiecher; Hari Ram Upadhayay; Yusheng Zhang
Journal:  J Soils Sediments       Date:  2020-09-16       Impact factor: 3.308

3.  Improving the design and implementation of sediment fingerprinting studies: summary and outcomes of the TRACING 2021 Scientific School.

Authors:  Olivier Evrard; Pedro V G Batista; Jaume Company; Aymeric Dabrin; Anthony Foucher; Amaury Frankl; Julián García-Comendador; Arnaud Huguet; Niels Lake; Ivan Lizaga; Núria Martínez-Carreras; Oldrich Navratil; Cécile Pignol; Virginie Sellier
Journal:  J Soils Sediments       Date:  2022-04-23       Impact factor: 3.536

Review 4.  Environmental DNA analysis as an emerging non-destructive method for plant biodiversity monitoring: a review.

Authors:  Pritam Banerjee; Kathryn A Stewart; Gobinda Dey; Caterina M Antognazza; Raju Kumar Sharma; Jyoti Prakash Maity; Santanu Saha; Hideyuki Doi; Natasha de Vere; Michael W Y Chan; Pin-Yun Lin; Hung-Chun Chao; Chien-Yen Chen
Journal:  AoB Plants       Date:  2022-07-02       Impact factor: 3.138

  4 in total

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