Literature DB >> 30787180

AMP and GMP Catabolism in Arabidopsis Converge on Xanthosine, Which Is Degraded by a Nucleoside Hydrolase Heterocomplex.

Chiara Baccolini1, Claus-Peter Witte2.   

Abstract

Plants can fully catabolize purine nucleotides. A firmly established central intermediate is the purine base xanthine. In the current widely accepted model of plant purine nucleotide catabolism, xanthine can be generated in various ways involving either inosine and hypoxanthine or guanosine and xanthosine as intermediates. In a comprehensive mutant analysis involving single and multiple mutants of urate oxidase, xanthine dehydrogenase, nucleoside hydrolases, guanosine deaminase, and hypoxanthine guanine phosphoribosyltransferase, we demonstrate that purine nucleotide catabolism in Arabidopsis (Arabidopsis thaliana) mainly generates xanthosine, but not inosine and hypoxanthine, and that xanthosine is derived from guanosine deamination and a second source, likely xanthosine monophosphate dephosphorylation. Nucleoside hydrolase 1 (NSH1) is known to be essential for xanthosine hydrolysis, but the in vivo function of a second cytosolic nucleoside hydrolase, NSH2, is unclear. We demonstrate that NSH1 activates NSH2 in vitro and in vivo, forming a complex with almost two orders of magnitude higher catalytic efficiency for xanthosine hydrolysis than observed for NSH1 alone. Remarkably, an inactive NSH1 point mutant can activate NSH2 in vivo, fully preventing purine nucleoside accumulation in nsh1 background. Our data lead to an altered model of purine nucleotide catabolism that includes an NSH heterocomplex as a central component.
© 2019 American Society of Plant Biologists. All rights reserved.

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Year:  2019        PMID: 30787180      PMCID: PMC6482636          DOI: 10.1105/tpc.18.00899

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  11 in total

1.  Nucleotide Metabolism in Plants.

Authors:  Claus-Peter Witte; Marco Herde
Journal:  Plant Physiol       Date:  2019-10-22       Impact factor: 8.340

2.  Structure Characterization of Escherichia coli Pseudouridine Kinase PsuK.

Authors:  Xiaojia Li; Kangjie Li; Wenting Guo; Yan Wen; Chunyan Meng; Baixing Wu
Journal:  Front Microbiol       Date:  2022-06-17       Impact factor: 6.064

3.  A Kinase and a Glycosylase Catabolize Pseudouridine in the Peroxisome to Prevent Toxic Pseudouridine Monophosphate Accumulation.

Authors:  Mingjia Chen; Claus-Peter Witte
Journal:  Plant Cell       Date:  2020-01-06       Impact factor: 11.277

4.  The Consequences of a Disruption in Cyto-Nuclear Coadaptation on the Molecular Response to a Nitrate Starvation in Arabidopsis.

Authors:  Fabien Chardon; Gwendal Cueff; Etienne Delannoy; Fabien Aubé; Aurélia Lornac; Magali Bedu; Françoise Gilard; Stéphanie Pateyron; Hélène Rogniaux; Audrey Gargaros; Hakim Mireau; Loïc Rajjou; Marie-Laure Martin-Magniette; Françoise Budar
Journal:  Plants (Basel)       Date:  2020-05-01

5.  Structural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.

Authors:  Sang-Hoon Kim; Claus-Peter Witte; Sangkee Rhee
Journal:  Nucleic Acids Res       Date:  2021-01-11       Impact factor: 16.971

6.  Nucleoside Metabolism Is Induced in Common Bean During Early Seedling Development.

Authors:  Elena Delgado-García; Pedro Piedras; Guadalupe Gómez-Baena; Isabel M García-Magdaleno; Manuel Pineda; Gregorio Gálvez-Valdivieso
Journal:  Front Plant Sci       Date:  2021-03-25       Impact factor: 5.753

7.  Initiation of cytosolic plant purine nucleotide catabolism involves a monospecific xanthosine monophosphate phosphatase.

Authors:  Katharina J Heinemann; Sun-Young Yang; Henryk Straube; Nieves Medina-Escobar; Marina Varbanova-Herde; Marco Herde; Sangkee Rhee; Claus-Peter Witte
Journal:  Nat Commun       Date:  2021-11-25       Impact factor: 14.919

Review 8.  Structure, Oligomerization and Activity Modulation in N-Ribohydrolases.

Authors:  Massimo Degano
Journal:  Int J Mol Sci       Date:  2022-02-25       Impact factor: 5.923

9.  Enhanced nucleotide analysis enables the quantification of deoxynucleotides in plants and algae revealing connections between nucleoside and deoxynucleoside metabolism.

Authors:  Henryk Straube; Markus Niehaus; Sarah Zwittian; Claus-Peter Witte; Marco Herde
Journal:  Plant Cell       Date:  2021-04-17       Impact factor: 11.277

Review 10.  Analysis of Nucleosides and Nucleotides in Plants: An Update on Sample Preparation and LC-MS Techniques.

Authors:  Henryk Straube; Claus-Peter Witte; Marco Herde
Journal:  Cells       Date:  2021-03-20       Impact factor: 6.600

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