| Literature DB >> 30778304 |
Wenxu Pan1, Chuan Liu2, Jihang Zhang2, Xubin Gao2, Shiyong Yu1,2, Hu Tan1,2, Jie Yu1,2, Dehui Qian1,2, Jiabei Li1,2, Shizhu Bian1,2, Jie Yang2, Chen Zhang1, Lan Huang1,2, Jun Jin1,2.
Abstract
Appetite loss is a common symptom that occurs in high altitude (HA) for lowlanders. Previous studies indicated that hypoxia is the initiating vital factor of HA appetite loss. PPARA, EPAS1, EGLN1, HIF1A, HIF1AN, and NFE2L2 play important roles in hypoxic responses. We aimed to explore the association of these hypoxia-related gene polymorphisms with HA appetite loss. In this study, we enrolled 416 young men who rapidly ascended to Lhasa (3700 m) from Chengdu (<500m) by plane. PPARA, EPAS1, EGLN1, HIF1A, HIF1AN, and NFE2L2 were genotyped by MassARRAY. Appetite scores were measured to identify HA appetite loss. Logistic regression and multiple genetic models were tested to evaluate the association between the single nucleotide polymorphisms (SNPs) and risk of HA appetite loss in crude and adjusted (age and SaO2) analysis. Subsequently, Haploview software was used to analyze the linkage disequilibrium (LD), haplotype construction and the association of diverse haplotypes with the risk of HA appetite loss. Our results revealed that allele "A" in PPARA rs4253747 was significantly associated with the increased risk of HA appetite loss. Codominant, dominant, recessive, and log-additive models of PPARA rs4253747 showed the increased risk of HA appetite loss in the crude and adjusted analysis. However, only dominant, overdominant, and log-additive models of EPAS1 rs6756667 showed decreased risk of HA appetite loss in the crude and adjusted analysis. Moreover, the results from haplotype-based test showed that the rs7292407-rs6520015 haplotype "AC" was associated with HA appetite loss in the crude analysis rather than the adjusted analysis. In this study, we first established the association of SNPs in PPARA (rs4253747) and EPAS1 (rs6756667) genes with susceptibility to HA appetite loss in Han Chinese young men. These findings provide novel insights into understanding the mechanisms involved in HA appetite loss.Entities:
Keywords: EPAS1; PPARA; appetite loss; high altitude; hypoxia; single nucleotide polymorphism
Year: 2019 PMID: 30778304 PMCID: PMC6369186 DOI: 10.3389/fphys.2019.00059
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.566
Characteristics of the subjects.
| Variable | Case ( | Control ( | |
|---|---|---|---|
| Age (year) | 23.15 ± 3.98 | 22.82 ± 3.57 | 0.629 |
| Height (cm) | 171.50 ± 4.79 | 171.80 ± 4.68 | 0.660 |
| Weight (kg) | 64.70 ± 7.81 | 64.47 ± 7.38 | 0.494 |
| BMI (kg/cm2) | 21.68 ± 2.09 | 21.83 ± 2.23 | 0.544 |
| SaO2 (%) | 87.97 ± 3.09 | 88.30 ± 2.89 | 0.308 |
Allele frequencies in cases and controls and odds ratio estimates for HA appetite loss risk.
| SNP | Gene | Allele | MAF- case | MAF- control | OR (95%CI) | ||
|---|---|---|---|---|---|---|---|
| rs135538 | C/G | 0.490 | 0.424 | 0.13 | 1.31 (0.8–2.04) | 0.233 | |
| rs4253623 | G/A | 0.146 | 0.126 | 0.80 | 1.22 (0.65–2.28) | 0.539 | |
| rs4253681 | C/T | 0.247 | 0.192 | 0.27 | 1.38 (0.81–2.33) | 0.231 | |
| rs4253747 | A/T | 0.297 | 0.192 | 0.27 | 1.79 (1.08–2.95) | 0.022∗ | |
| rs6520015 | C/T | 0.133 | 0.197 | 0.28 | 0.63 (0.33–1.17) | 0.141 | |
| rs7292407 | A/C | 0.104 | 0.173 | 0.10 | 0.60 (0.30–1.21) | 0.150 | |
| rs13419896 | A/G | 0.278 | 0.321 | 0.70 | 0.82 (0.51–1.34) | 0.429 | |
| rs1868092 | A/G | 0.066 | 0.085 | 0.26 | 0.74 (0.31–1.76) | 0.500 | |
| rs4953354 | G/A | 0.122 | 0.102 | 1.00 | 1.56 (0.74–3.28) | 0.236 | |
| rs6756667 | A/G | 0.080 | 0.135 | 0.33 | 0.59 (0.28–1.25) | 0.162 | |
| rs2275279 | T/A | 0.240 | 0.273 | 0.15 | 0.85 (0.51–1.41) | 0.529 | |
| rs2790882 | G/A | 0.442 | 0.425 | 0.48 | 1.07 (0.69–1.68) | 0.762 | |
| rs480902 | T/C | 0.438 | 0.421 | 0.49 | 1.07 (0.69–1.67) | 0.762 | |
| rs1339891 | A/G | 0.099 | 0.089 | 1.00 | 1.15 (0.55–2.41) | 0.702 | |
| rs2066140 | C/G | 0.433 | 0.421 | 0.48 | 1.06 (0.68–1.65) | 0.812 | |
| rs2486736 | C/G | 0.442 | 0.420 | 0.48 | 1.09 (0.70–1.71) | 0.693 | |
| rs12434438 | G/A | 0.269 | 0.243 | 0.88 | 1.15 (0.69–1.90) | 0.600 | |
| rs2301104 | C/G | 0.052 | 0.079 | 0.71 | 0.69 (0.27–1.72) | 0.420 | |
| rs2301112 | C/A | 0.035 | 0.040 | 1.00 | 0.98 (0.31–3.12) | 0.976 | |
| rs966824 | T/C | 0.200 | 0.171 | 0.84 | 1.21 (0.69–2.13) | 0.504 | |
| rs10883512 | G/A | 0.084 | 0.074 | 0.23 | 1.15 (0.52–2.58) | 0.727 | |
| rs11190602 | C/T | 0.142 | 0.117 | 0.58 | 1.26 (0.66–2.42) | 0.478 | |
| rs2295778 | G/C | 0.235 | 0.256 | 1.00 | 0.90 (0.53–1.50) | 0.673 | |
| rs10497511 | C/T | 0.325 | 0.302 | 0.50 | 1.12 (0.70–1.80) | 0.631 | |
| rs1962142 | T/C | 0.278 | 0.273 | 1.00 | 1.04 (0.64–1.69) | 0.888 | |
| rs2364722 | G/A | 0.451 | 0.455 | 0.73 | 0.99 (0.63–1.55) | 0.959 | |
| rs6721961 | T/G | 0.349 | 0.321 | 0.90 | 1.13 (0.71–1.80) | 0.601 | |
Single nucleotide polymorphism of rs4253747 analysis under different genetic models with the risk of HA appetite loss.
| SNP | Model | Geno type | Control | Case | Crude | Adjusteda | ||
|---|---|---|---|---|---|---|---|---|
| OR (95%CI) | OR (95%CI) | |||||||
| PPARA- rs4253747 | Codominant | T/T | 199 (64.2%) | 53 (50%) | 1.00 | – | 1.00 | – |
| A/T | 103 (33.2%) | 43 (40.6%) | 1.57 (0.98–2.50) | – | 1.59 (1.00–2.54) | – | ||
| A/A | 8 (2.6%) | 10 (9.4%) | 4.69 (1.77–12.48) | 0.004∗ | 5.05 (1.88–13.57) | 0.002∗ | ||
| Dominant | T/T | 199 (64.2%) | 53 (50%) | 1.00 | – | 1.00 | – | |
| A/T-A/A | 111 (35.8%) | 53 (50%) | 1.79 (1.15–2.80) | 0.010∗ | 1.83 (1.17–2.86) | 0.008∗ | ||
| Recessive | T/T-A/T | 302 (97.4%) | 96 (90.6%) | 1.00 | – | 1.00 | – | |
| A/A | 8 (2.6%) | 10 (9.4%) | 3.93 (1.51–10.25) | 0.006∗ | 4.19 (1.59–11.02) | 0.004∗ | ||
| Overdominant | T/T-A/A | 207 (66.8%) | 63 (59.4%) | 1.00 | – | 1.00 | – | |
| A/T | 103 (33.2%) | 43 (40.6%) | 1.37 (0.87–2.16) | 0.170 | 1.38 (0.88–2.18) | 0.160 | ||
| Log-additive | – | – | – | 1.83 (1.26–2.64) | 0.002∗ | 1.87 (1.29–2.71) | 0.001∗ | |
Single nucleotide polymorphism of rs6756667 analysis under different genetic models with the risk of HA appetite loss.
| SNP | Model | Geno type | Control | Case | Crude | Adjusteda | ||
|---|---|---|---|---|---|---|---|---|
| OR (95%CI) | OR (95%CI) | |||||||
| EPAS1- rs6756667 | Codominant | G/G | 229 (73.9%) | 89 (84%) | 1.00 | – | 1.00 | – |
| A/G | 78 (25.2%) | 17 (16%) | 0.56 (0.31–1.00) | 0.052 | 0.56 (0.31–1.00) | 0.053 | ||
| A/A | 3 (1%) | 0 (0%) | 0.00 | – | 0.00 | – | ||
| Dominant | G/G | 229 (73.9%) | 89 (84%) | 1.00 | – | 1.00 | – | |
| A/G-A/A | 81 (26.1%) | 17 (16%) | 0.54 (0.30–0.96) | 0.030∗ | 0.54 (0.30–0.96) | 0.030∗ | ||
| Recessive | G/G-A/G | 307 (99%) | 106 (100%) | 1.00 | – | 1.00 | – | |
| A/A | 3 (1%) | 0 (0%) | 0.00 | 0.180 | 0.00 | 0.180 | ||
| Overdominant | G/G-A/A | 232 (74.8%) | 89 (84%) | 1.00 | – | 1.00 | – | |
| A/G | 78 (25.2%) | 17 (16%) | 0.57 (0.32–1.01) | 0.047∗ | 0.57 (0.32–1.02) | 0.048∗ | ||
| Log-additive | – | – | – | 0.53 (0.30–0.94) | 0.022∗ | 0.54 (0.30–0.94) | 0.023∗ | |
FIGURE 1Haplotype block map for SNPs of the PPARA (A) and EPAS1 (B) genes.
PPARA haplotype frequencies and the association with risk of HA appetite loss.
| Block | Haplotype | Freq (case) | Freq (control) | Crude | Adjustedb | |||
|---|---|---|---|---|---|---|---|---|
| OR (95%CI) | OR (95%CI) | |||||||
| 1 | CT | 0.868 | 0.803 | 0.035∗ | 1.00 | – | 1.00 | – |
| AC | 0.112 | 0.173 | 0.035∗ | 0.61 (0.38 –0.98) | 0.041∗ | 0.62 (0.39 –1.00) | 0.050 | |
| CC | 0.020 | 0.024 | 0.764 | 0.77 (0.25–2.41) | 0.660 | 0.78 (0.25–2.47) | 0.680 | |
| 2 | AG | 0.503 | 0.572 | 0.080 | 1.00 | – | 1.00 | – |
| AC | 0.351 | 0.302 | 0.186 | 1.30 (0.93 –1.82) | 0.120 | 1.32 (0.95 –1.86) | 0.100 | |
| GC | 0.139 | 0.121 | 0.485 | 1.29 (0.79 –2.11) | 0.310 | 1.34 (0.82 –2.20) | 0.250 | |