Literature DB >> 30769723

Characteristics of the Perception of Different Severity Measures of Citrus Canker and the Relationships Between the Various Symptom Types.

C H Bock1, P E Parker2, A Z Cook2, T R Gottwald3.   

Abstract

Citrus canker is a disease of citrus and is caused by the bacterial pathogen Xanthomonas citri subsp. citri. Ways of managing the disease are being sought, and accurate, precise, reproducible disease assessment is needed for monitoring epidemics. The objective of this study was to investigate the characteristics of visual assessment of citrus canker symptoms compared with actual disease measured using image analysis (IA). Images of 210 citrus leaves with a range of incidence and severity of citrus canker were assessed by three plant pathologists (VR1-3) and by IA. The number of lesions (L), % area necrotic (%AN), and % area necrotic+chlorotic (%ANC) were assessed. The best relationships were found between %AN and %ANC (r2 = 0.41 to 0.87), and the worst between L and %AN (r2 = 0.27 to 0.66). Bland-Altman plots showed various sources of rater error in assessments, including under- and over-estimation, proportional error, and heterogeneity of variation dependent on actual disease magnitude. There was a tendency to overestimate area diseased, but not lesion counts, and this tendency was pronounced at lower disease severity, with a leaf having more lesions tending to be assessed as having greater area infected compared with a leaf with fewer lesions but equal actual area infected. The rater estimations of disease were less accurate or precise with increasing actual disease severity as indicated by the fit of a normal probability density function-the incidence of extreme values increases with increasing actual disease. For example, for %ANC the kurtosis of the distribution ranged from 17.92 to 1.18, 0.51, and 0.22 in actual disease category ranges of 0 to 10, 11 to 20, 21 to 30, and 31 to 40% area infected, respectively. The log variance of the estimates plotted against log actual disease for all three raters over two assessment occasions gave a linear relationship for L, %AN, and %ANC (r2 = 0.74, 0.65, and 0.74, respectively). Training should improve the accuracy, precision, and reproducibility of raters, and knowledge of the characteristics of disease assessment should help develop and target the training more appropriately and address specific causes and sources of error.

Entities:  

Year:  2008        PMID: 30769723     DOI: 10.1094/PDIS-92-6-0927

Source DB:  PubMed          Journal:  Plant Dis        ISSN: 0191-2917            Impact factor:   4.438


  3 in total

1.  Chlorophyll Fluorescence Imaging as a Tool for Evaluating Disease Resistance of Common Bean Lines in the Western Amazon Region of Colombia.

Authors:  Juan Carlos Suárez; José Iván Vanegas; Amara Tatiana Contreras; José Alexander Anzola; Milan O Urban; Stephen E Beebe; Idupulapati M Rao
Journal:  Plants (Basel)       Date:  2022-05-21

Review 2.  Understanding the ramifications of quantitative ordinal scales on accuracy of estimates of disease severity and data analysis in plant pathology.

Authors:  Kuo-Szu Chiang; Clive H Bock
Journal:  Trop Plant Pathol       Date:  2021-07-13       Impact factor: 2.404

3.  Saving time maintaining reliability: a new method for quantification of Tetranychus urticae damage in Arabidopsis whole rosettes.

Authors:  Dairon Ojeda-Martinez; Manuel Martinez; Isabel Diaz; M Estrella Santamaria
Journal:  BMC Plant Biol       Date:  2020-08-27       Impact factor: 4.215

  3 in total

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