Literature DB >> 30758356

Three-dimensional depth profiling of prostate tissue by micro ATR-FTIR spectroscopic imaging with variable angles of incidence.

Cai Li Song1, Sergei G Kazarian.   

Abstract

The depth of penetration and effective thickness in ATR-FTIR spectroscopic imaging are dependent on the wavelength and angle of incidence of the incoming light beam. We have demonstrated, for the first time, that variable angle micro ATR-FTIR, which is created via the insertion of circular apertures, is intrinsic at examining embedded components within a prostate tissue specimen. This is done by constructing a 3D model from the stacks of 2D chemical images obtained, each of which represents the spatial distribution of a chosen spectral band assigned to the component of interest at a different probing depth. ATR-FTIR imaging is also shown to have the ability to resolve subcellular components of cells such as organelles. For differentiation of diseased and non-diseased tissues, statistical tests are employed to analyse the spectral datasets obtained. When the second derivative of the spectral datasets was subjected to t-test analysis, the spectral differences between both samples in the fingerprint region are shown to be more significant at a shallow depth of penetration, with the greatest variance at the spectral band of 1235 cm-1 (vasPO2-), depicted by plotting the scores of PCA on its first two PCs. Overall, this paper demonstrates a non-destructive, label-free approach for examining heterogeneous biological samples in the z-direction to construct a 3D model using micro ATR-FTIR imaging, in a qualitative and semi-quantitative manner.

Mesh:

Year:  2019        PMID: 30758356     DOI: 10.1039/c8an01929k

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  4 in total

1.  The FT-IR and Raman Spectroscopies as Tools for Biofilm Characterization Created by Cariogenic Streptococci.

Authors:  Barbara Gieroba; Mikolaj Krysa; Kinga Wojtowicz; Adrian Wiater; Małgorzata Pleszczyńska; Michał Tomczyk; Anna Sroka-Bartnicka
Journal:  Int J Mol Sci       Date:  2020-05-27       Impact factor: 5.923

Review 2.  ATR-FTIR spectroscopy and spectroscopic imaging for the analysis of biopharmaceuticals.

Authors:  Hannah Tiernan; Bernadette Byrne; Sergei G Kazarian
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2020-06-22       Impact factor: 4.098

3.  Fourier transform infrared spectroscopic imaging of colon tissues: evaluating the significance of amide I and C-H stretching bands in diagnostic applications with machine learning.

Authors:  Cai Li Song; Martha Z Vardaki; Robert D Goldin; Sergei G Kazarian
Journal:  Anal Bioanal Chem       Date:  2019-08-16       Impact factor: 4.142

4.  Apparatus for High-Precision Angle-Resolved Reflection Spectroscopy in the Mid-Infrared Region.

Authors:  Takashi Kuroda; Siti Chalimah; Yuanzhao Yao; Naoki Ikeda; Yoshimasa Sugimoto; Kazuaki Sakoda
Journal:  Appl Spectrosc       Date:  2020-10-12       Impact factor: 2.388

  4 in total

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