Literature DB >> 30753828

Aging-like Spontaneous Epigenetic Silencing Facilitates Wnt Activation, Stemness, and BrafV600E-Induced Tumorigenesis.

Yong Tao1, Byunghak Kang1, Daniel A Petkovich1, Yuba R Bhandari1, Julie In2, Genevieve Stein-O'Brien3, Xiangqian Kong1, Wenbing Xie1, Nicholas Zachos2, Shinji Maegawa4, Himani Vaidya5, Stephen Brown1, Ray-Whay Chiu Yen1, Xiaojian Shao6, Jai Thakor1, Zhihao Lu7, Yi Cai1, Yuezheng Zhang8, Izaskun Mallona9, Miguel Angel Peinado9, Cynthia A Zahnow1, Nita Ahuja1, Elana Fertig3, Jean-Pierre Issa5, Stephen B Baylin10, Hariharan Easwaran11.   

Abstract

We addressed the precursor role of aging-like spontaneous promoter DNA hypermethylation in initiating tumorigenesis. Using mouse colon-derived organoids, we show that promoter hypermethylation spontaneously arises in cells mimicking the human aging-like phenotype. The silenced genes activate the Wnt pathway, causing a stem-like state and differentiation defects. These changes render aged organoids profoundly more sensitive than young ones to transformation by BrafV600E, producing the typical human proximal BRAFV600E-driven colon adenocarcinomas characterized by extensive, abnormal gene-promoter CpG-island methylation, or the methylator phenotype (CIMP). Conversely, CRISPR-mediated simultaneous inactivation of a panel of the silenced genes markedly sensitizes to BrafV600E-induced transformation. Our studies tightly link aging-like epigenetic abnormalities to intestinal cell fate changes and predisposition to oncogene-driven colon tumorigenesis.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  BRAF(V600E); CIMP; CpG-island DNA methylation; aging; cancer risk; colon adenocarcinomas; epigenetic silencing; transformation; tumor predisposition; tumorigenesis

Mesh:

Substances:

Year:  2019        PMID: 30753828      PMCID: PMC6636642          DOI: 10.1016/j.ccell.2019.01.005

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  75 in total

1.  Preserved genetic diversity in organoids cultured from biopsies of human colorectal cancer metastases.

Authors:  Fleur Weeber; Marc van de Wetering; Marlous Hoogstraat; Krijn K Dijkstra; Oscar Krijgsman; Thomas Kuilman; Christa G M Gadellaa-van Hooijdonk; Daphne L van der Velden; Daniel S Peeper; Edwin P J G Cuppen; Robert G Vries; Hans Clevers; Emile E Voest
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-12       Impact factor: 11.205

2.  Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer.

Authors:  Andrew E Teschendorff; Usha Menon; Aleksandra Gentry-Maharaj; Susan J Ramus; Daniel J Weisenberger; Hui Shen; Mihaela Campan; Houtan Noushmehr; Christopher G Bell; A Peter Maxwell; David A Savage; Elisabeth Mueller-Holzner; Christian Marth; Gabrijela Kocjan; Simon A Gayther; Allison Jones; Stephan Beck; Wolfgang Wagner; Peter W Laird; Ian J Jacobs; Martin Widschwendter
Journal:  Genome Res       Date:  2010-03-10       Impact factor: 9.043

3.  Molecular dissection of premalignant colorectal lesions reveals early onset of the CpG island methylator phenotype.

Authors:  Eiichiro Yamamoto; Hiromu Suzuki; Hiro-o Yamano; Reo Maruyama; Masanori Nojima; Seiko Kamimae; Takeshi Sawada; Masami Ashida; Kenjiro Yoshikawa; Tomoaki Kimura; Ryo Takagi; Taku Harada; Ryo Suzuki; Akiko Sato; Masahiro Kai; Yasushi Sasaki; Takashi Tokino; Tamotsu Sugai; Kohzoh Imai; Yasuhisa Shinomura; Minoru Toyota
Journal:  Am J Pathol       Date:  2012-09-17       Impact factor: 4.307

Review 4.  CpG island methylator phenotype in cancer.

Authors:  Jean-Pierre Issa
Journal:  Nat Rev Cancer       Date:  2004-12       Impact factor: 60.716

5.  Genetic reconstitution of tumorigenesis in primary intestinal cells.

Authors:  Kunishige Onuma; Masako Ochiai; Kaoru Orihashi; Mami Takahashi; Toshio Imai; Hitoshi Nakagama; Yoshitaka Hippo
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-17       Impact factor: 11.205

6.  Aging and DNA methylation in colorectal mucosa and cancer.

Authors:  N Ahuja; Q Li; A L Mohan; S B Baylin; J P Issa
Journal:  Cancer Res       Date:  1998-12-01       Impact factor: 12.701

7.  Chronic Cigarette Smoke-Induced Epigenomic Changes Precede Sensitization of Bronchial Epithelial Cells to Single-Step Transformation by KRAS Mutations.

Authors:  Michelle Vaz; Stephen Y Hwang; Ioannis Kagiampakis; Jillian Phallen; Ashwini Patil; Heather M O'Hagan; Lauren Murphy; Cynthia A Zahnow; Edward Gabrielson; Victor E Velculescu; Hariharan P Easwaran; Stephen B Baylin
Journal:  Cancer Cell       Date:  2017-09-11       Impact factor: 31.743

8.  Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

Authors:  Felix Krueger; Simon R Andrews
Journal:  Bioinformatics       Date:  2011-04-14       Impact factor: 6.937

9.  The BRAF oncoprotein functions through the transcriptional repressor MAFG to mediate the CpG Island Methylator phenotype.

Authors:  Minggang Fang; Jianhong Ou; Lloyd Hutchinson; Michael R Green
Journal:  Mol Cell       Date:  2014-09-11       Impact factor: 17.970

10.  Modulation of age- and cancer-associated DNA methylation change in the healthy colon by aspirin and lifestyle.

Authors:  Faiza Noreen; Martin Röösli; Pawel Gaj; Jakub Pietrzak; Stefan Weis; Patric Urfer; Jaroslaw Regula; Primo Schär; Kaspar Truninger
Journal:  J Natl Cancer Inst       Date:  2014-06-28       Impact factor: 13.506

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  47 in total

Review 1.  Epigenetic Aging: More Than Just a Clock When It Comes to Cancer.

Authors:  Ming Yu; William M Grady; William D Hazelton; Georg E Luebeck
Journal:  Cancer Res       Date:  2019-11-06       Impact factor: 12.701

Review 2.  Serrated Colorectal Cancer: The Road Less Travelled?

Authors:  Yuki Nakanishi; Maria T Diaz-Meco; Jorge Moscat
Journal:  Trends Cancer       Date:  2019-10-28

3.  Targeting cellular senescence in cancer and aging: roles of p53 and its isoforms.

Authors:  Jessica Beck; Casmir Turnquist; Izumi Horikawa; Curtis Harris
Journal:  Carcinogenesis       Date:  2020-08-12       Impact factor: 4.944

Review 4.  DNA methylation-based predictors of health: applications and statistical considerations.

Authors:  Paul D Yousefi; Matthew Suderman; Ryan Langdon; Oliver Whitehurst; George Davey Smith; Caroline L Relton
Journal:  Nat Rev Genet       Date:  2022-03-18       Impact factor: 53.242

5.  Pharmacologic induction of innate immune signaling directly drives homologous recombination deficiency.

Authors:  Lena J McLaughlin; Lora Stojanovic; Aksinija A Kogan; Julia L Rutherford; Eun Yong Choi; Ray-Whay Chiu Yen; Limin Xia; Ying Zou; Rena G Lapidus; Stephen B Baylin; Michael J Topper; Feyruz V Rassool
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-10       Impact factor: 11.205

6.  JKAMP inhibits the osteogenic capacity of adipose-derived stem cells in diabetic osteoporosis by modulating the Wnt signaling pathway through intragenic DNA methylation.

Authors:  Shuanglin Peng; Sirong Shi; Gang Tao; Yanjing Li; Dexuan Xiao; Lang Wang; Qing He; Xiaoxiao Cai; Jingang Xiao
Journal:  Stem Cell Res Ther       Date:  2021-02-12       Impact factor: 6.832

7.  The DNA methylation landscape of multiple myeloma shows extensive inter- and intrapatient heterogeneity that fuels transcriptomic variability.

Authors:  Jennifer Derrien; Catherine Guérin-Charbonnel; Victor Gaborit; Loïc Campion; Magali Devic; Elise Douillard; Nathalie Roi; Hervé Avet-Loiseau; Olivier Decaux; Thierry Facon; Jan-Philipp Mallm; Roland Eils; Nikhil C Munshi; Philippe Moreau; Carl Herrmann; Florence Magrangeas; Stéphane Minvielle
Journal:  Genome Med       Date:  2021-08-09       Impact factor: 11.117

Review 8.  Genetic and biological hallmarks of colorectal cancer.

Authors:  Jiexi Li; Xingdi Ma; Deepavali Chakravarti; Shabnam Shalapour; Ronald A DePinho
Journal:  Genes Dev       Date:  2021-06       Impact factor: 11.361

9.  Highly recurrent CBS epimutations in gastric cancer CpG island methylator phenotypes and inflammation.

Authors:  Huang Kie Kyon; Arnoud Boot; Nisha Padmanabhan; Kevin Lim; Supriya Srivastava; Shuwen Chen; Zhiyuan Wu; Hyung-Ok Lee; Vineeth T Mukundan; Charlene Chan; Yarn Kit Chan; Ong Xuewen; Jason J Pitt; Zul Fazreen Adam Isa; Manjie Xing; Ming Hui Lee; Angie Lay Keng Tan; Shamaine Ho Wei Ting; Micah A Luftig; Dennis Kappei; Warren D Kruger; Jinsong Bian; Ying Swan Ho; Ming Teh; Steve George Rozen; Patrick Tan
Journal:  Genome Biol       Date:  2021-06-01       Impact factor: 13.583

Review 10.  Colorectal Cancer: From Genetic Landscape to Targeted Therapy.

Authors:  Mouade El Bali; Joaira Bakkach; Mohcine Bennani Mechita
Journal:  J Oncol       Date:  2021-07-06       Impact factor: 4.375

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