| Literature DB >> 30746337 |
Tatiana Alekseevna Marakhovskaya1, Elena Viktorovna Butenko1, Konstantin Alekseevich Kovalenko1, Elena Vladimirovna Mashkina1.
Abstract
BACKGROUND: The study was aimed to investigate the association of VEGFA gene polymorphic variants -2578C>A (rs699947) and -634G>C (rs2010963) and TGFB1 gene 915G>C (rs1800471) and gene expression level with miscarriage in the first trimester.Entities:
Keywords: Chorionic tissue; Decidua; Gene expression; Gene polymorphic variants; Growth factors; Miscarriage
Year: 2018 PMID: 30746337 PMCID: PMC6328980
Source DB: PubMed Journal: J Reprod Infertil ISSN: 2228-5482
Description of women groups
| Women with the first pregnancy | 14 | 9.6 (4.8–14.5) | 24 | 16.5 (10.5–22.6) |
| Women without delivery in anamnesis | 30 | 20.7 (14.1–27.3) | 50 | 34.5 (26.7–42.2) |
| Women with a pregnancy in anamnesis ended with a life birth | 118 | 81.4 (75.0–87.7) | 83 | 57.3 (49.9–65.3) |
| Women with a missed abortion in the first trimester in anamnesis | 0 | 0 | 23 | 15.9 (9.9–21.8) |
Description of studied growth factor gene loci
| rs699947 (-2578C>A) | 6:43768652 | Promoter region | Decreases gene expression | |
| rs2010963 (-634G>C) | 6:43770613 | 5′UTR | Increases gene expression | |
| rs1800471 (915G> C) | 19:41352971 | Exon 1 | Missense mutation (25Arg>Pro) increases gene expression | |
Sequence of PCR probes and primers
| Forward 5′- GGATGTCTACCAGCGCAGC -3′ | |
| Reverse 5′- TCTGGGTACTCCTGGAAGATGTC -3′ | |
| ProbeFam- TCTGCCGTCCCATTGAGACCCTG-RTQ-1 | |
| Forward 5′- ATGGCATGAACCGGCCTT -3′ | |
| Reverse 5′- AGGTCCTTGCGGAAGTCAA -3′ | |
| ProbeFam- CGCCGAGCCCTGGACACCA –RTQ-1 | |
| Forward 5′-AGGTCGGAGTCAACGGATTT-3′ | |
| Reverse 5′-ATCGCCCCACTTGATTTTGG-3′ | |
| Probe Fam-GGCGCCTGGTCACCAGGGCT-BHQ1 | |
The frequency of alleles and genotypes (abs., %) for polymorphic variant -2578C>A of VEGFA gene in the blood cells of women with miscarriage
| C/C | 45 (31.0) | 23 (18.7) | 6.14 (0.05) | 0.51 (0.29–0.91) |
| C/A | 62 (42.8) | 68 (55.3) | 1.66 (1.02–2.69) | |
| A/A | 38 (26.2) | 32 (26.0) | 0.99 (0.57–1.71) | |
| -2578A allele | 0.476 | 0.537 | 1.96 (0.16) | 1.28 (0.91–1.79) |
| HWE, χ2 (P) | 2.96 (0.09) | 1.53 (0.22) |
χ2: Comparison of frequencies of genotypes and alleles with the control
The frequency of alleles and genotypes (abs., %) for polymorphic variants of VEGFA and TGFB1 genes in the blood cells of women with miscarriage
| G/G | 70 (48.3) | 77 (53.8) | |
| G/C | 68 (46.9) | 51 (35.7) | 5.66 (0.06) |
| C/C | 7 (4.8) | 15 (10.5) | |
| -634C allele | 0.283 | 0.283 | 0 (0.99) |
| HWE, | 3.54 (0.06) | 2.11 (0.15) | |
| C/C | 121 (83.4) | 110 (81.5) | |
| C/G | 23 (15.9) | 23 (17.0) | 0.50 (0.78) |
| G/G | 1 (0.7) | 2 (1.5) | |
| 915G allele | 0.086 | 0.100 | 0.32 (0.57) |
| HWE, | 0.01 (0.93) | 0.39 (0.53) | |
χ2: Comparison of frequencies of genotypes and alleles with the control
The frequency of alleles and genotypes (abs., %) for polymorphic variants of VEGFA and TGFB1 genes in chorionic cells
| G/G | 13 (50) | 20 (57.1) | 1.52 (0.47) |
| G/C | 12 (46.2) | 15 (42.9) | |
| C/C | 1 (3.8) | 0 (0) | |
| -634C allele | 0.269 | 0.214 | 0.5 (0.48) |
| HWE, χ2 (P) | 0.78 (0.38) | 2.6 (0.11) | |
| C/G | 21 (80.8) | 21 (61.8) | 2.53 (0.28) |
| C/G | 5 (19.2) | 13 (38.2) | |
| G/G | 0 (0) | 0 (0) | |
| 915G allele | 0.096 | 0.191 | 2.09 (0.15) |
| HWE,χ2 (P) | 0.29 (0.59) | 1.90 (0.17) | |
χ2: Comparison of frequencies of genotypes and alleles of the control
Figure 1.Distribution of high- and low-risk genotypes in the best two-locus model VEGFA(-634G>C (rs2010963), -2578C >A) (rs699947). High- (Dark shading) and low-risk (Light shading). The number of pregnancy loss subjects (Left black bar in boxes) and control subjects (Right black bar in boxes) is shown for each genotype combination. Significant low risk genotype is marked by the oval (p<0.05)
Figure 2.Distribution of high- and low-risk genotypes in the best three-locus model VEGFA (-634G>C (rs2010963), -2578C>A) (rs699947). High- (Dark shading) and low-risk (Light shading). The number of pregnancy loss subjects (Left black bar in boxes) and control subjects (Right black bar in boxes) is shown for each genotype combination. Significant low risk genotype is marked by the oval (p<0.05)
Figure 3.VEGFA gene expression level in the cells of chorionic and decidual tissues regarding GAPDH gene expression in normally progressing pregnancy (A) and pregnancy loss (B)
Rate of change of the expression level (2−ΔΔCt) of the VEGFA and TGFB1 genes in miscarriage, relative to physiological pregnancy
| 1.6 | 3.2 | |
| 0.85 | 1.2 |
Figure 4.TGFB1 gene expression level in the cells of chorionic and decidual tissues regarding GAPDH gene expression in normally progressing pregnancy (A) and pregnancy loss (B)
Figure 5.The ratio of the VEGFA and TGFB1 genes expression level (ΔCt) in the cells of chorionic and decidual tissues regarding GAPDH gene expression in normally progressing pregnancy (A) and pregnancy loss (B)