| Literature DB >> 30744993 |
Shoshana J Wodak1, Emanuele Paci2, Nikolay V Dokholyan3, Igor N Berezovsky4, Amnon Horovitz5, Jing Li6, Vincent J Hilser6, Ivet Bahar7, John Karanicolas8, Gerhard Stock9, Peter Hamm10, Roland H Stote11, Jerome Eberhardt11, Yassmine Chebaro11, Annick Dejaegere11, Marco Cecchini12, Jean-Pierre Changeux13, Peter G Bolhuis14, Jocelyne Vreede14, Pietro Faccioli15, Simone Orioli15, Riccardo Ravasio16, Le Yan17, Carolina Brito18, Matthieu Wyart16, Paraskevi Gkeka19, Ivan Rivalta20, Giulia Palermo21, J Andrew McCammon22, Joanna Panecka-Hofman23, Rebecca C Wade24, Antonella Di Pizio25, Masha Y Niv26, Ruth Nussinov27, Chung-Jung Tsai28, Hyunbum Jang28, Dzmitry Padhorny29, Dima Kozakov29, Tom McLeish30.
Abstract
Allosteric regulation plays an important role in many biological processes, such as signal transduction, transcriptional regulation, and metabolism. Allostery is rooted in the fundamental physical properties of macromolecular systems, but its underlying mechanisms are still poorly understood. A collection of contributions to a recent interdisciplinary CECAM (Center Européen de Calcul Atomique et Moléculaire) workshop is used here to provide an overview of the progress and remaining limitations in the understanding of the mechanistic foundations of allostery gained from computational and experimental analyses of real protein systems and model systems. The main conceptual frameworks instrumental in driving the field are discussed. We illustrate the role of these frameworks in illuminating molecular mechanisms and explaining cellular processes, and describe some of their promising practical applications in engineering molecular sensors and informing drug design efforts.Entities:
Keywords: Allostery; allosteric drugs; allosteric material; allosteric switches; elastic network models; energy landscape; molecular dynamics; protein conformational changes; protein function; regulation; signal transduction
Mesh:
Substances:
Year: 2019 PMID: 30744993 PMCID: PMC6688844 DOI: 10.1016/j.str.2019.01.003
Source DB: PubMed Journal: Structure ISSN: 0969-2126 Impact factor: 5.006