Literature DB >> 30737283

Structural basis of the target-binding mode of the G protein-coupled receptor kinase-interacting protein in the regulation of focal adhesion dynamics.

Mingfu Liang1, Xingqiao Xie1,2, Jian Pan1, Gaowei Jin1, Cong Yu3,4,5, Zhiyi Wei6.   

Abstract

Focal adhesions (FAs) are specialized sites where intracellular cytoskeleton elements connect to the extracellular matrix and thereby control cell motility. FA assembly depends on various scaffold proteins, including the G protein-coupled receptor kinase-interacting protein 1 (GIT1), paxillin, and liprin-α. Although liprin-α and paxillin are known to competitively interact with GIT1, the molecular basis governing these interactions remains elusive. To uncover the underlying mechanisms of how GIT1 is involved in FA assembly by alternatively binding to liprin-α and paxillin, here we solved the crystal structures of GIT1 in complex with liprin-α and paxillin at 1.8 and 2.6 Å resolutions, respectively. These structures revealed that the paxillin-binding domain (PBD) of GIT1 employs distinct binding modes to recognize a single α-helix of liprin-α and the LD4 motif of paxillin. Structure-based design of protein variants produced two binding-deficient GIT1 variants; specifically, these variants lost the ability to interact with liprin-α only or with both liprin-α and paxillin. Expressing the GIT1 variants in COS7 cells, we discovered that the two PBD-meditated interactions play different roles in either recruiting GIT1 to FA or facilitating FA assembly. Additionally, we demonstrate that, unlike for the known binding mode of the FAT domain to LD motifs, the PBD of GIT1 uses different surface patches to achieve high selectivity in LD motif recognition. In summary, our results have uncovered the mechanisms by which GIT1's PBD recognizes cognate paxillin and liprin-α structures, information we anticipate will be useful for future investigations of GIT1-protein interactions in cells.
© 2019 Liang et al.

Entities:  

Keywords:  GTPase activating protein (GAP); PTPRF-interacting protein alpha 2 (PPFIA2); cell migration; complex structure; crystal structure; focal adhesion; paxillin (PXN); protein complex; protein-protein interaction; single alpha-helix; structural biology; structure-function

Mesh:

Substances:

Year:  2019        PMID: 30737283      PMCID: PMC6463692          DOI: 10.1074/jbc.RA118.006915

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  54 in total

Review 1.  Assembly of cell regulatory systems through protein interaction domains.

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Journal:  Science       Date:  2003-04-18       Impact factor: 47.728

2.  Crystal structures of free and ligand-bound focal adhesion targeting domain of Pyk2.

Authors:  James Lulo; Satoru Yuzawa; Joseph Schlessinger
Journal:  Biochem Biophys Res Commun       Date:  2009-04-07       Impact factor: 3.575

3.  The mouse and human Liprin-alpha family of scaffolding proteins: genomic organization, expression profiling and regulation by alternative splicing.

Authors:  Magdalena Zürner; Susanne Schoch
Journal:  Genomics       Date:  2008-12-13       Impact factor: 5.736

Review 4.  Focal adhesions: transmembrane junctions between the extracellular matrix and the cytoskeleton.

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5.  The liprin protein SYD-2 regulates the differentiation of presynaptic termini in C. elegans.

Authors:  M Zhen; Y Jin
Journal:  Nature       Date:  1999-09-23       Impact factor: 49.962

6.  PHENIX: a comprehensive Python-based system for macromolecular structure solution.

Authors:  Paul D Adams; Pavel V Afonine; Gábor Bunkóczi; Vincent B Chen; Ian W Davis; Nathaniel Echols; Jeffrey J Headd; Li-Wei Hung; Gary J Kapral; Ralf W Grosse-Kunstleve; Airlie J McCoy; Nigel W Moriarty; Robert Oeffner; Randy J Read; David C Richardson; Jane S Richardson; Thomas C Terwilliger; Peter H Zwart
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

7.  GIT1 paxillin-binding domain is a four-helix bundle, and it binds to both paxillin LD2 and LD4 motifs.

Authors:  Ziwei M Zhang; Joseph A Simmerman; Cristina D Guibao; Jie J Zheng
Journal:  J Biol Chem       Date:  2008-04-30       Impact factor: 5.157

8.  A Critical Role of GIT1 in Vertebrate and Invertebrate Brain Development.

Authors:  Sung-Tae Hong; Won Mah
Journal:  Exp Neurobiol       Date:  2015-03-03       Impact factor: 3.261

Review 9.  FAK and paxillin, two potential targets in pancreatic cancer.

Authors:  Rajani Kanteti; Surinder K Batra; Frances E Lennon; Ravi Salgia
Journal:  Oncotarget       Date:  2016-05-24

10.  GIT1 functions in a motile, multi-molecular signaling complex that regulates protrusive activity and cell migration.

Authors:  Ri-ichiroh Manabe; Mykola Kovalenko; Donna J Webb; Alan Rick Horwitz
Journal:  J Cell Sci       Date:  2002-04-01       Impact factor: 5.285

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  1 in total

Review 1.  Liprin-α-Mediated Assemblies and Their Roles in Synapse Formation.

Authors:  Xingqiao Xie; Mingfu Liang; Cong Yu; Zhiyi Wei
Journal:  Front Cell Dev Biol       Date:  2021-03-19
  1 in total

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