Literature DB >> 30728462

MINA-1 and WAGO-4 are part of regulatory network coordinating germ cell death and RNAi in C. elegans.

Ataman Sendoel1, Deni Subasic1,2, Luca Ducoli1,2,3, Martin Keller1,2, Erich Michel4,5, Ines Kohler1, Kapil Dev Singh1,2,6, Xue Zheng1, Anneke Brümmer7, Jochen Imig3,7,8,9, Shivendra Kishore7, Yibo Wu10,11, Alexander Kanitz7, Andres Kaech12, Nitish Mittal7, Ana M Matia-González13, André P Gerber13, Mihaela Zavolan7, Ruedi Aebersold10,14, Jonathan Hall3, Frédéric H-T Allain4, Michael O Hengartner15,16.   

Abstract

Post-transcriptional control of mRNAs by RNA-binding proteins (RBPs) has a prominent role in the regulation of gene expression. RBPs interact with mRNAs to control their biogenesis, splicing, transport, localization, translation, and stability. Defects in such regulation can lead to a wide range of human diseases from neurological disorders to cancer. Many RBPs are conserved between Caenorhabditis elegans and humans, and several are known to regulate apoptosis in the adult C. elegans germ line. How these RBPs control apoptosis is, however, largely unknown. Here, we identify mina-1(C41G7.3) in a RNA interference-based screen as a novel regulator of apoptosis, which is exclusively expressed in the adult germ line. The absence of MINA-1 causes a dramatic increase in germ cell apoptosis, a reduction in brood size, and an impaired P granules organization and structure. In vivo crosslinking immunoprecipitation experiments revealed that MINA-1 binds a set of mRNAs coding for RBPs associated with germ cell development. Additionally, a system-wide analysis of a mina-1 deletion mutant compared with wild type, including quantitative proteome and transcriptome data, hints to a post-transcriptional regulatory RBP network driven by MINA-1 during germ cell development in C. elegans. In particular, we found that the germline-specific Argonaute WAGO-4 protein levels are increased in mina-1 mutant background. Phenotypic analysis of double mutant mina-1;wago-4 revealed that contemporary loss of MINA-1 and WAGO-4 strongly rescues the phenotypes observed in mina-1 mutant background. To strengthen this functional interaction, we found that upregulation of WAGO-4 in mina-1 mutant animals causes hypersensitivity to exogenous RNAi. Our comprehensive experimental approach allowed us to describe a phenocritical interaction between two RBPs controlling germ cell apoptosis and exogenous RNAi. These findings broaden our understanding of how RBPs can orchestrate different cellular events such as differentiation and death in C. elegans.

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Year:  2019        PMID: 30728462      PMCID: PMC6748153          DOI: 10.1038/s41418-019-0291-z

Source DB:  PubMed          Journal:  Cell Death Differ        ISSN: 1350-9047            Impact factor:   15.828


  76 in total

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Journal:  Cell       Date:  1999-10-15       Impact factor: 41.582

2.  Demonstration of the in vivo interaction of key cell death regulators by structure-based design of second-site suppressors.

Authors:  J Parrish; H Metters; L Chen; D Xue
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-24       Impact factor: 11.205

3.  A conserved RNA-binding protein controls germline stem cells in Caenorhabditis elegans.

Authors:  Sarah L Crittenden; David S Bernstein; Jennifer L Bachorik; Beth E Thompson; Maria Gallegos; Andrei G Petcherski; Gary Moulder; Robert Barstead; Marvin Wickens; Judith Kimble
Journal:  Nature       Date:  2002-05-22       Impact factor: 49.962

4.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

5.  Creation of low-copy integrated transgenic lines in Caenorhabditis elegans.

Authors:  V Praitis; E Casey; D Collar; J Austin
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

6.  KH domain-containing proteins of yeast: absence of a fragile X gene homologue.

Authors:  J R Currie; W T Brown
Journal:  Am J Med Genet       Date:  1999-05-28

7.  Programmed cell death mediated by ced-3 and ced-4 protects Caenorhabditis elegans from Salmonella typhimurium-mediated killing.

Authors:  A Aballay; F M Ausubel
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

8.  Caenorhabditis elegans HUS-1 is a DNA damage checkpoint protein required for genome stability and EGL-1-mediated apoptosis.

Authors:  E Randal Hofmann; Stuart Milstein; Simon J Boulton; Mianjia Ye; Jen J Hofmann; Lilli Stergiou; Anton Gartner; Marc Vidal; Michael O Hengartner
Journal:  Curr Biol       Date:  2002-11-19       Impact factor: 10.834

9.  Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions.

Authors:  M Piotto; V Saudek; V Sklenár
Journal:  J Biomol NMR       Date:  1992-11       Impact factor: 2.835

10.  Systematic functional analysis of the Caenorhabditis elegans genome using RNAi.

Authors:  Ravi S Kamath; Andrew G Fraser; Yan Dong; Gino Poulin; Richard Durbin; Monica Gotta; Alexander Kanapin; Nathalie Le Bot; Sergio Moreno; Marc Sohrmann; David P Welchman; Peder Zipperlen; Julie Ahringer
Journal:  Nature       Date:  2003-01-16       Impact factor: 49.962

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  2 in total

Review 1.  Germ granules and gene regulation in the Caenorhabditis elegans germline.

Authors:  Carolyn M Phillips; Dustin L Updike
Journal:  Genetics       Date:  2022-03-03       Impact factor: 4.402

2.  Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules.

Authors:  Patricia Giselle Cipriani; Olivia Bay; John Zinno; Michelle Gutwein; Hin Hark Gan; Vinay K Mayya; George Chung; Jia-Xuan Chen; Hala Fahs; Yu Guan; Thomas F Duchaine; Matthias Selbach; Fabio Piano; Kristin C Gunsalus
Journal:  Elife       Date:  2021-07-05       Impact factor: 8.140

  2 in total

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