Literature DB >> 30721153

MicroRNA-155 coordinates the immunological landscape within murine melanoma and correlates with immunity in human cancers.

H Atakan Ekiz1, Thomas B Huffaker1, Allie H Grossmann2,3,4, W Zac Stephens1, Matthew A Williams1, June L Round1, Ryan M O'Connell1.   

Abstract

miR-155 has recently emerged as an important promoter of antitumor immunity through its functions in T lymphocytes. However, the impact of T cell-expressed miR-155 on immune cell dynamics in solid tumors remains unclear. In the present study, we used single-cell RNA sequencing to define the CD45+ immune cell populations at different time points within B16F10 murine melanoma tumors growing in either wild-type or miR-155 T cell conditional knockout (TCKO) mice. miR-155 was required for optimal T cell activation and reinforced the T cell response at the expense of infiltrating myeloid cells. Further, myeloid cells from tumors growing in TCKO mice were defined by an increase in wound healing genes and a decreased IFN-γ-response gene signature. Finally, we found that miR-155 expression predicted a favorable outcome in human melanoma patients and was associated with a strong immune signature. Moreover, gene expression analysis of The Cancer Genome Atlas (TCGA) data revealed that miR-155 expression also correlates with an immune-enriched subtype in 29 other human solid tumors. Together, our study provides an unprecedented analysis of the cell types and gene expression signatures of immune cells within experimental melanoma tumors and elucidates the role of miR-155 in coordinating antitumor immune responses in mammalian tumors.

Entities:  

Keywords:  Adaptive immunity; Cancer; Expression profiling; Immunology; Oncology

Mesh:

Substances:

Year:  2019        PMID: 30721153      PMCID: PMC6482995          DOI: 10.1172/jci.insight.126543

Source DB:  PubMed          Journal:  JCI Insight        ISSN: 2379-3708


  54 in total

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Journal:  Immunol Rev       Date:  2010-07       Impact factor: 12.988

2.  Reprogramming tumor-associated dendritic cells in vivo using miRNA mimetics triggers protective immunity against ovarian cancer.

Authors:  Juan R Cubillos-Ruiz; Jason R Baird; Amelia J Tesone; Melanie R Rutkowski; Uciane K Scarlett; Ana L Camposeco-Jacobs; Jorge Anadon-Arnillas; Noah M Harwood; Murray Korc; Steven N Fiering; Lorenzo F Sempere; Jose R Conejo-Garcia
Journal:  Cancer Res       Date:  2012-02-03       Impact factor: 12.701

Review 3.  Interactions between lymphocytes and myeloid cells regulate pro- versus anti-tumor immunity.

Authors:  David G DeNardo; Pauline Andreu; Lisa M Coussens
Journal:  Cancer Metastasis Rev       Date:  2010-06       Impact factor: 9.264

4.  Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq.

Authors:  Itay Tirosh; Benjamin Izar; Sanjay M Prakadan; Marc H Wadsworth; Daniel Treacy; John J Trombetta; Asaf Rotem; Christopher Rodman; Christine Lian; George Murphy; Mohammad Fallahi-Sichani; Ken Dutton-Regester; Jia-Ren Lin; Ofir Cohen; Parin Shah; Diana Lu; Alex S Genshaft; Travis K Hughes; Carly G K Ziegler; Samuel W Kazer; Aleth Gaillard; Kellie E Kolb; Alexandra-Chloé Villani; Cory M Johannessen; Aleksandr Y Andreev; Eliezer M Van Allen; Monica Bertagnolli; Peter K Sorger; Ryan J Sullivan; Keith T Flaherty; Dennie T Frederick; Judit Jané-Valbuena; Charles H Yoon; Orit Rozenblatt-Rosen; Alex K Shalek; Aviv Regev; Levi A Garraway
Journal:  Science       Date:  2016-04-08       Impact factor: 47.728

5.  MicroRNA-155 is required for effector CD8+ T cell responses to virus infection and cancer.

Authors:  Jan C Dudda; Bruno Salaun; Yun Ji; Douglas C Palmer; Gwennaelle C Monnot; Estelle Merck; Caroline Boudousquie; Daniel T Utzschneider; Thelma M Escobar; Rachel Perret; Stefan A Muljo; Michael Hebeisen; Nathalie Rufer; Dietmar Zehn; Alena Donda; Nicholas P Restifo; Werner Held; Luca Gattinoni; Pedro Romero
Journal:  Immunity       Date:  2013-04-18       Impact factor: 31.745

6.  The Immune Landscape of Cancer.

Authors:  Vésteinn Thorsson; David L Gibbs; Scott D Brown; Denise Wolf; Dante S Bortone; Tai-Hsien Ou Yang; Eduard Porta-Pardo; Galen F Gao; Christopher L Plaisier; James A Eddy; Elad Ziv; Aedin C Culhane; Evan O Paull; I K Ashok Sivakumar; Andrew J Gentles; Raunaq Malhotra; Farshad Farshidfar; Antonio Colaprico; Joel S Parker; Lisle E Mose; Nam Sy Vo; Jianfang Liu; Yuexin Liu; Janet Rader; Varsha Dhankani; Sheila M Reynolds; Reanne Bowlby; Andrea Califano; Andrew D Cherniack; Dimitris Anastassiou; Davide Bedognetti; Younes Mokrab; Aaron M Newman; Arvind Rao; Ken Chen; Alexander Krasnitz; Hai Hu; Tathiane M Malta; Houtan Noushmehr; Chandra Sekhar Pedamallu; Susan Bullman; Akinyemi I Ojesina; Andrew Lamb; Wanding Zhou; Hui Shen; Toni K Choueiri; John N Weinstein; Justin Guinney; Joel Saltz; Robert A Holt; Charles S Rabkin; Alexander J Lazar; Jonathan S Serody; Elizabeth G Demicco; Mary L Disis; Benjamin G Vincent; Ilya Shmulevich
Journal:  Immunity       Date:  2018-04-05       Impact factor: 43.474

7.  Exosome-delivered microRNAs modulate the inflammatory response to endotoxin.

Authors:  Margaret Alexander; Ruozhen Hu; Marah C Runtsch; Dominique A Kagele; Timothy L Mosbruger; Tanya Tolmachova; Miguel C Seabra; June L Round; Diane M Ward; Ryan M O'Connell
Journal:  Nat Commun       Date:  2015-06-18       Impact factor: 14.919

8.  Upregulation of miRNA-155 promotes tumour angiogenesis by targeting VHL and is associated with poor prognosis and triple-negative breast cancer.

Authors:  W Kong; L He; E J Richards; S Challa; C-X Xu; J Permuth-Wey; J M Lancaster; D Coppola; T A Sellers; J Y Djeu; J Q Cheng
Journal:  Oncogene       Date:  2013-01-28       Impact factor: 9.867

9.  ImmPort, toward repurposing of open access immunological assay data for translational and clinical research.

Authors:  Sanchita Bhattacharya; Patrick Dunn; Cristel G Thomas; Barry Smith; Henry Schaefer; Jieming Chen; Zicheng Hu; Kelly A Zalocusky; Ravi D Shankar; Shai S Shen-Orr; Elizabeth Thomson; Jeffrey Wiser; Atul J Butte
Journal:  Sci Data       Date:  2018-02-27       Impact factor: 6.444

10.  The effect of cellular context on miR-155-mediated gene regulation in four major immune cell types.

Authors:  Jing-Ping Hsin; Yuheng Lu; Gabriel B Loeb; Christina S Leslie; Alexander Y Rudensky
Journal:  Nat Immunol       Date:  2018-09-17       Impact factor: 25.606

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  21 in total

1.  T Cell-Expressed microRNA-155 Reduces Lifespan in a Mouse Model of Age-Related Chronic Inflammation.

Authors:  H Atakan Ekiz; Andrew G Ramstead; Soh-Hyun Lee; Morgan C Nelson; Kaylyn M Bauer; Jared A Wallace; Ruozhen Hu; June L Round; Jared Rutter; Micah J Drummond; Dinesh S Rao; Ryan M O'Connell
Journal:  J Immunol       Date:  2020-03-11       Impact factor: 5.422

2.  Mitochondrial Pyruvate Carrier 1 Promotes Peripheral T Cell Homeostasis through Metabolic Regulation of Thymic Development.

Authors:  Andrew G Ramstead; Jared A Wallace; Soh-Hyun Lee; Kaylyn M Bauer; William W Tang; H Atakan Ekiz; Thomas E Lane; Ahmad A Cluntun; Matthew L Bettini; June L Round; Jared Rutter; Ryan M O'Connell
Journal:  Cell Rep       Date:  2020-03-03       Impact factor: 9.423

Review 3.  microRNA-based diagnostic and therapeutic applications in cancer medicine.

Authors:  Lorenzo F Sempere; Asfar S Azmi; Anna Moore
Journal:  Wiley Interdiscip Rev RNA       Date:  2021-05-17       Impact factor: 9.957

4.  A Stat1 bound enhancer promotes Nampt expression and function within tumor associated macrophages.

Authors:  Thomas B Huffaker; H Atakan Ekiz; Cindy Barba; Soh-Hyun Lee; Marah C Runtsch; Morgan C Nelson; Kaylyn M Bauer; William W Tang; Timothy L Mosbruger; James E Cox; June L Round; Warren P Voth; Ryan M O'Connell
Journal:  Nat Commun       Date:  2021-05-11       Impact factor: 14.919

5.  Identification of Small Molecule Inhibitors of a Mir155 Transcriptional Reporter in Th17 Cells.

Authors:  Anju Singh; Myagmarjav Dashynam; Bryan Chim; Thelma M Escobar; Xiuhuai Liu; Xin Hu; Samarjit Patnaik; Xin Xu; Noel Southall; Juan Marugan; Ajit Jadhav; Vanja Lazarevic; Stefan A Muljo; Marc Ferrer
Journal:  Sci Rep       Date:  2021-06-01       Impact factor: 4.996

6.  Microglia influence host defense, disease, and repair following murine coronavirus infection of the central nervous system.

Authors:  Vrushali Mangale; Amber R Syage; H Atakan Ekiz; Dominic D Skinner; Yuting Cheng; Colleen L Stone; R Marshall Brown; Ryan M O'Connell; Kim N Green; Thomas E Lane
Journal:  Glia       Date:  2020-05-25       Impact factor: 7.452

7.  Identification of molecular features correlating with tumor immunity in gastric cancer by multi-omics data analysis.

Authors:  Yin He; Xiaosheng Wang
Journal:  Ann Transl Med       Date:  2020-09

8.  Blocking Short-Form Ron Eliminates Breast Cancer Metastases through Accumulation of Stem-Like CD4+ T Cells That Subvert Immunosuppression.

Authors:  Shu-Chin Alicia Lai; Harika Gundlapalli; H Atakan Ekiz; Amanda Jiang; Elvelyn Fernandez; Alana L Welm
Journal:  Cancer Discov       Date:  2021-12-01       Impact factor: 38.272

Review 9.  microRNAs Shape Myeloid Cell-Mediated Resistance to Cancer Immunotherapy.

Authors:  Elena Daveri; Elisabetta Vergani; Eriomina Shahaj; Laura Bergamaschi; Stefano La Magra; Michela Dosi; Chiara Castelli; Monica Rodolfo; Licia Rivoltini; Viviana Vallacchi; Veronica Huber
Journal:  Front Immunol       Date:  2020-07-22       Impact factor: 7.561

10.  CIPR: a web-based R/shiny app and R package to annotate cell clusters in single cell RNA sequencing experiments.

Authors:  H Atakan Ekiz; Christopher J Conley; W Zac Stephens; Ryan M O'Connell
Journal:  BMC Bioinformatics       Date:  2020-05-15       Impact factor: 3.169

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