Literature DB >> 30715624

Pontibacter chitinilyticus sp. nov., a novel chitin-hydrolysing bacterium isolated from soil.

Geeta Chhetri1, Jiyoun Kim1, Inhyup Kim1, Myung Kyum Kim2, Taegun Seo3.   

Abstract

A Gram-stain negative, non-motile, orange-red-pigmented, asporogenous, rod-shaped bacterial strain, designated 17gy-14T, was isolated from a soil sample collected from a Seoul Women's University field. The strain can grow at 7-37 °C, pH 6.0-8.0, and can tolerate up to 5.5% (w/v) NaCl concentration. Flexirubin-type pigments were absent. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the strain 17gy-14T strain belongs to the genus Pontibacter in the family Cytophagaceae with sequence similarities ranging from 95.4 to 92.9% with other type strains of the genus Pontibacter. The predominant cellular fatty acids were identified as iso-C15:0, anteiso-C15:0, iso-C17:0 3-OH and summed feature 4 (comprising iso-C17:1 I/anteiso-C17:1 B). The predominant menaquinone was identified as MK-7. The DNA G+C content was determined to be 48.7 mol%. The major polar lipid was found to be phosphatidylethanolamine. Based on phenotypic, chemotaxonomic and phylogenetic analyses, strain 17gy-14T is concluded to represent a novel species of the genus Pontibacter in the phylum Bacteroidetes, for which the name Pontibacter chitinilyticus sp. nov. is proposed. The type strain is 17gy-14T (=KCTC 52914T=NRBC 113056T).

Entities:  

Keywords:  Chitin hydrolysis; Cytophagaceae; Polyphasic taxonomy; Pontibacter chitinilyticus sp. nov; Soil bacteria

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Year:  2019        PMID: 30715624     DOI: 10.1007/s10482-019-01235-1

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  3 in total

1.  Pontibacter qinzhouensis sp. nov., isolated from rhizosphere soil of a mangrove plant Rhizophora stylosa.

Authors:  Songbiao Shi; Lifang Yang; Mingguo Jiang; Yibing Wang; Yan Zhou; Preecha Prathepha; Yudi N Ihsan
Journal:  Arch Microbiol       Date:  2022-05-05       Impact factor: 2.552

2.  Devosia rhizoryzae sp. nov., and Devosia oryziradicis sp. nov., novel plant growth promoting members of the genus Devosia, isolated from the rhizosphere of rice plants.

Authors:  Geeta Chhetri; Inhyup Kim; Minchung Kang; Jiyoun Kim; Yoonseop So; Taegun Seo
Journal:  J Microbiol       Date:  2021-11-26       Impact factor: 3.422

3.  Flavobacterium humi sp. nov., a flexirubin-type pigment producing bacterium, isolated from soil.

Authors:  Inhyup Kim; Jiyoun Kim; Geeta Chhetri; Taegun Seo
Journal:  J Microbiol       Date:  2019-11-22       Impact factor: 3.422

  3 in total

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