Literature DB >> 30709826

Interspecies Chemical Signaling in a Methane-Oxidizing Bacterial Community.

Aaron W Puri1, Darren Liu2, Amy L Schaefer3, Zheng Yu2, Mitchell W Pesesky2, E Peter Greenberg3, Mary E Lidstrom2,3.   

Abstract

Multiple species of bacteria oxidize methane in the environment after it is produced by anaerobic ecosystems. These organisms provide reduced carbon substrates for species that cannot oxidize methane themselves, thereby serving a key role in these niches while also sequestering this potent greenhouse gas before it enters the atmosphere. Deciphering the molecular details of how methane-oxidizing bacteria interact in the environment enables us to understand an important aspect that shapes the structures and functions of these communities. Here we show that many members of the Methylomonas genus possess a LuxR-type acyl-homoserine lactone (acyl-HSL) receptor/transcription factor that is highly homologous to MbaR from the quorum-sensing (QS) system of Methylobacter tundripaludum, another methane oxidizer that has been isolated from the same environment. We reconstitute this detection system in Escherichia coli and use mutant and transcriptomic analysis to show that the receptor/transcription factor from Methylomonas sp. strain LW13 is active and alters LW13 gene expression in response to the acyl-HSL produced by M. tundripaludum These findings provide a molecular mechanism for how two species of bacteria that may compete for resources in the environment can interact in a specific manner through a chemical signal.IMPORTANCE Methanotrophs are bacteria that sequester methane, a significant greenhouse gas, and thereby perform an important ecosystem function. Understanding the mechanisms by which these organisms interact in the environment may ultimately allow us to manipulate and to optimize this activity. Here we show that members of a genus of methane-oxidizing bacteria can be influenced by a chemical signal produced by a possibly competing species. This provides insight into how gene expression can be controlled in these bacterial communities via an exogenous chemical signal.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  LuxR solo; acyl-homoserine lactone; methane; methanotroph; orphan LuxR; quorum sensing; sociomicrobiology

Mesh:

Substances:

Year:  2019        PMID: 30709826      PMCID: PMC6585505          DOI: 10.1128/AEM.02702-18

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  48 in total

1.  Activity of purified QscR, a Pseudomonas aeruginosa orphan quorum-sensing transcription factor.

Authors:  Joon-Hee Lee; Yannick Lequette; E Peter Greenberg
Journal:  Mol Microbiol       Date:  2006-01       Impact factor: 3.501

Review 2.  LuxR-family 'solos': bachelor sensors/regulators of signalling molecules.

Authors:  Sujatha Subramoni; Vittorio Venturi
Journal:  Microbiology       Date:  2009-04-21       Impact factor: 2.777

3.  High-resolution metagenomics targets specific functional types in complex microbial communities.

Authors:  Marina G Kalyuzhnaya; Alla Lapidus; Natalia Ivanova; Alex C Copeland; Alice C McHardy; Ernest Szeto; Asaf Salamov; Igor V Grigoriev; Dominic Suciu; Samuel R Levine; Victor M Markowitz; Isidore Rigoutsos; Susannah G Tringe; David C Bruce; Paul M Richardson; Mary E Lidstrom; Ludmila Chistoserdova
Journal:  Nat Biotechnol       Date:  2008-09       Impact factor: 54.908

Review 4.  Quorum-sensing in Gram-negative bacteria.

Authors:  N A Whitehead; A M Barnard; H Slater; N J Simpson; G P Salmond
Journal:  FEMS Microbiol Rev       Date:  2001-08       Impact factor: 16.408

5.  Transcriptome analysis of the Vibrio fischeri LuxR-LuxI regulon.

Authors:  Luis Caetano M Antunes; Amy L Schaefer; Rosana B R Ferreira; Nan Qin; Ann M Stevens; Edward G Ruby; E Peter Greenberg
Journal:  J Bacteriol       Date:  2007-09-07       Impact factor: 3.490

6.  Census of solo LuxR genes in prokaryotic genomes.

Authors:  Sanjarbek Hudaiberdiev; Kumari S Choudhary; Roberto Vera Alvarez; Zsolt Gelencsér; Balázs Ligeti; Doriano Lamba; Sándor Pongor
Journal:  Front Cell Infect Microbiol       Date:  2015-03-12       Impact factor: 5.293

7.  Tundrenone: An Atypical Secondary Metabolite from Bacteria with Highly Restricted Primary Metabolism.

Authors:  Aaron W Puri; Emily Mevers; Timothy R Ramadhar; Daniel Petras; Darren Liu; Jörn Piel; Pieter C Dorrestein; E Peter Greenberg; Mary E Lidstrom; Jon Clardy
Journal:  J Am Chem Soc       Date:  2018-01-30       Impact factor: 15.419

8.  Complete Genome Sequence of Methylomonas denitrificans Strain FJG1, an Obligate Aerobic Methanotroph That Can Couple Methane Oxidation with Denitrification.

Authors:  Fabini D Orata; K Dimitri Kits; Lisa Y Stein
Journal:  Genome Announc       Date:  2018-04-26

9.  Fast and accurate long-read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2010-01-15       Impact factor: 6.937

10.  IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes.

Authors:  I-Min A Chen; Ken Chu; Krishna Palaniappan; Manoj Pillay; Anna Ratner; Jinghua Huang; Marcel Huntemann; Neha Varghese; James R White; Rekha Seshadri; Tatyana Smirnova; Edward Kirton; Sean P Jungbluth; Tanja Woyke; Emiley A Eloe-Fadrosh; Natalia N Ivanova; Nikos C Kyrpides
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

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  2 in total

1.  Evidence for methanobactin "Theft" and novel chalkophore production in methanotrophs: impact on methanotrophic-mediated methylmercury degradation.

Authors:  Christina S Kang-Yun; Xujun Liang; Philip Dershwitz; Wenyu Gu; Aloys Schepers; Andrew Flatley; Josef Lichtmannegger; Hans Zischka; Lijie Zhang; Xia Lu; Baohua Gu; Joshua C Ledesma; Daly J Pelger; Alan A DiSpirito; Jeremy D Semrau
Journal:  ISME J       Date:  2021-07-21       Impact factor: 10.302

2.  A Complex Interplay between Nitric Oxide, Quorum Sensing, and the Unique Secondary Metabolite Tundrenone Constitutes the Hypoxia Response in Methylobacter.

Authors:  Zheng Yu; Mitchell Pesesky; Lei Zhang; Jing Huang; Mari Winkler; Ludmila Chistoserdova
Journal:  mSystems       Date:  2020-01-21       Impact factor: 6.496

  2 in total

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