Literature DB >> 30702443

Multiparametric liquid biopsy analysis in metastatic prostate cancer.

Emmanuelle Hodara1, Gareth Morrison1, Alexander Cunha1, Daniel Zainfeld1, Tong Xu1, Yucheng Xu1, Paul W Dempsey2, Paul C Pagano2, Farideh Bischoff3, Aditi Khurana4, Samuel Koo4, Marc Ting4, Philip D Cotter4, Mathew W Moore4, Shelly Gunn4, Joshua Usher5, Shahrooz Rabizadeh6, Peter Danenberg7, Kathleen Danenberg5, John Carpten8, Tanya Dorff1, David Quinn1, Amir Goldkorn1.   

Abstract

Molecular profiling of prostate cancer with liquid biopsies, such as circulating tumor cells (CTCs) and cell-free nucleic acid analysis, yields informative yet distinct data sets. Additional insights may be gained by simultaneously interrogating multiple liquid biopsy components to construct a more comprehensive molecular disease profile. We conducted an initial proof-of-principle study aimed at piloting this multiparametric approach. Peripheral blood samples from men with metastatic castrate-resistant prostate cancer were analyzed simultaneously for CTC enumeration, single-cell copy number variations, CTC DNA and matched cell-free DNA mutations, and plasma cell-free RNA levels of androgen receptor (AR) and AR splice variant (ARV7). In addition, liquid biopsies were compared with matched tumor profiles when available, and a second liquid biopsy was drawn and analyzed at disease progression in a subset of patients. In this manner, multiparametric liquid biopsy profiles were successfully generated for each patient and time point, demonstrating the feasibility of this approach and highlighting shared as well as unique cancer-relevant alterations. With further refinement and validation in large cohorts, multiparametric liquid biopsies can optimally integrate disparate but clinically informative data sets and maximize their utility for molecularly directed, real-time patient management.

Entities:  

Keywords:  Expression profiling; Molecular genetics; Oncology; Prostate cancer

Mesh:

Substances:

Year:  2019        PMID: 30702443      PMCID: PMC6483502          DOI: 10.1172/jci.insight.125529

Source DB:  PubMed          Journal:  JCI Insight        ISSN: 2379-3708


  35 in total

1.  Circulating Tumor Cell Number as a Response Measure of Prolonged Survival for Metastatic Castration-Resistant Prostate Cancer: A Comparison With Prostate-Specific Antigen Across Five Randomized Phase III Clinical Trials.

Authors:  Glenn Heller; Robert McCormack; Thian Kheoh; Arturo Molina; Matthew R Smith; Robert Dreicer; Fred Saad; Ronald de Wit; Dana T Aftab; Mohammad Hirmand; Ana Limon; Karim Fizazi; Martin Fleisher; Johann S de Bono; Howard I Scher
Journal:  J Clin Oncol       Date:  2017-12-22       Impact factor: 44.544

2.  AR-V7 in Peripheral Whole Blood of Patients with Castration-resistant Prostate Cancer: Association with Treatment-specific Outcome Under Abiraterone and Enzalutamide.

Authors:  Anna Katharina Seitz; Silvia Thoene; Andreas Bietenbeck; Roman Nawroth; Robert Tauber; Mark Thalgott; Sebastian Schmid; Ramona Secci; Margitta Retz; Jürgen E Gschwend; Jürgen Ruland; Christof Winter; Matthias M Heck
Journal:  Eur Urol       Date:  2017-08-14       Impact factor: 20.096

3.  Performance comparison of two androgen receptor splice variant 7 (AR-V7) detection methods.

Authors:  Christof Bernemann; Julie Steinestel; Verena Humberg; Martin Bögemann; Andres Jan Schrader; Jochen K Lennerz
Journal:  BJU Int       Date:  2018-02-14       Impact factor: 5.588

4.  Rb1 and Trp53 cooperate to suppress prostate cancer lineage plasticity, metastasis, and antiandrogen resistance.

Authors:  Sheng Yu Ku; Spencer Rosario; Yanqing Wang; Ping Mu; Mukund Seshadri; Zachary W Goodrich; Maxwell M Goodrich; David P Labbé; Eduardo Cortes Gomez; Jianmin Wang; Henry W Long; Bo Xu; Myles Brown; Massimo Loda; Charles L Sawyers; Leigh Ellis; David W Goodrich
Journal:  Science       Date:  2017-01-06       Impact factor: 47.728

5.  A Whole Blood Assay for AR-V7 and ARv567es in Patients with Prostate Cancer.

Authors:  Xichun Liu; Elisa Ledet; Dongying Li; Ary Dotiwala; Allie Steinberger; Allison Feibus; Jianzhuo Li; Yanfeng Qi; Jonathan Silberstein; Benjamin Lee; Yan Dong; Oliver Sartor; Haitao Zhang
Journal:  J Urol       Date:  2016-07-20       Impact factor: 7.450

6.  Docetaxel and estramustine compared with mitoxantrone and prednisone for advanced refractory prostate cancer.

Authors:  Daniel P Petrylak; Catherine M Tangen; Maha H A Hussain; Primo N Lara; Jeffrey A Jones; Mary Ellen Taplin; Patrick A Burch; Donna Berry; Carol Moinpour; Manish Kohli; Mitchell C Benson; Eric J Small; Derek Raghavan; E David Crawford
Journal:  N Engl J Med       Date:  2004-10-07       Impact factor: 91.245

7.  Docetaxel plus prednisone or mitoxantrone plus prednisone for advanced prostate cancer.

Authors:  Ian F Tannock; Ronald de Wit; William R Berry; Jozsef Horti; Anna Pluzanska; Kim N Chi; Stephane Oudard; Christine Théodore; Nicholas D James; Ingela Turesson; Mark A Rosenthal; Mario A Eisenberger
Journal:  N Engl J Med       Date:  2004-10-07       Impact factor: 91.245

Review 8.  Circulating Tumor DNA Assays in Clinical Cancer Research.

Authors:  Miguel R Ossandon; Lokesh Agrawal; Eric J Bernhard; Barbara A Conley; Sumana M Dey; Rao L Divi; Ping Guan; Tracy G Lively; Tawnya C McKee; Brian S Sorg; James V Tricoli
Journal:  J Natl Cancer Inst       Date:  2018-09-01       Impact factor: 13.506

9.  The evolutionary history of lethal metastatic prostate cancer.

Authors:  Christopher Foster; Douglas Easton; Ultan McDermott; David C Wedge; G Steven Bova; Gunes Gundem; Peter Van Loo; Barbara Kremeyer; Ludmil B Alexandrov; Jose M C Tubio; Elli Papaemmanuil; Daniel S Brewer; Heini M L Kallio; Gunilla Högnäs; Matti Annala; Kati Kivinummi; Victoria Goody; Calli Latimer; Sarah O'Meara; Kevin J Dawson; William Isaacs; Michael R Emmert-Buck; Matti Nykter; Zsofia Kote-Jarai; Hayley C Whitaker; David E Neal; Colin S Cooper; Rosalind A Eeles; Tapio Visakorpi; Peter J Campbell
Journal:  Nature       Date:  2015-04-01       Impact factor: 49.962

10.  Analysis of the genetic phylogeny of multifocal prostate cancer identifies multiple independent clonal expansions in neoplastic and morphologically normal prostate tissue.

Authors:  Colin S Cooper; Rosalind Eeles; David C Wedge; Peter Van Loo; Anne Y Warren; Christopher S Foster; Hayley C Whitaker; Ultan McDermott; Daniel S Brewer; David E Neal; Gunes Gundem; Ludmil B Alexandrov; Barbara Kremeyer; Adam Butler; Andrew G Lynch; Niedzica Camacho; Charlie E Massie; Jonathan Kay; Hayley J Luxton; Sandra Edwards; ZSofia Kote-Jarai; Nening Dennis; Sue Merson; Daniel Leongamornlert; Jorge Zamora; Cathy Corbishley; Sarah Thomas; Serena Nik-Zainal; Sarah O'Meara; Lucy Matthews; Jeremy Clark; Rachel Hurst; Richard Mithen; Robert G Bristow; Paul C Boutros; Michael Fraser; Susanna Cooke; Keiran Raine; David Jones; Andrew Menzies; Lucy Stebbings; Jon Hinton; Jon Teague; Stuart McLaren; Laura Mudie; Claire Hardy; Elizabeth Anderson; Olivia Joseph; Victoria Goody; Ben Robinson; Mark Maddison; Stephen Gamble; Christopher Greenman; Dan Berney; Steven Hazell; Naomi Livni; Cyril Fisher; Christopher Ogden; Pardeep Kumar; Alan Thompson; Christopher Woodhouse; David Nicol; Erik Mayer; Tim Dudderidge; Nimish C Shah; Vincent Gnanapragasam; Thierry Voet; Peter Campbell; Andrew Futreal; Douglas Easton; Michael R Stratton
Journal:  Nat Genet       Date:  2015-03-02       Impact factor: 38.330

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  18 in total

Review 1.  Cellular and Molecular Mechanisms Underlying Prostate Cancer Development: Therapeutic Implications.

Authors:  Ugo Testa; Germana Castelli; Elvira Pelosi
Journal:  Medicines (Basel)       Date:  2019-07-30

2.  Cancer transcriptomic profiling from rapidly enriched circulating tumor cells.

Authors:  Gareth J Morrison; Alexander T Cunha; Nita Jojo; Yucheng Xu; Yili Xu; Eric Kwok; Peggy Robinson; Tanya Dorff; David Quinn; John Carpten; Zarko Manojlovic; Amir Goldkorn
Journal:  Int J Cancer       Date:  2020-02-27       Impact factor: 7.396

Review 3.  Integration of Liquid Biopsies in Clinical Management of Metastatic Prostate Cancer.

Authors:  Varsha Tulpule; Gareth J Morrison; Mary Falcone; David I Quinn; Amir Goldkorn
Journal:  Curr Oncol Rep       Date:  2022-05-16       Impact factor: 5.945

4.  Combined Cell-free DNA and RNA Profiling of the Androgen Receptor: Clinical Utility of a Novel Multianalyte Liquid Biopsy Assay for Metastatic Prostate Cancer.

Authors:  Heidi Fettke; Edmond M Kwan; Maria M Docanto; Patricia Bukczynska; Nicole Ng; Lisa-Jane K Graham; Kate Mahon; Christine Hauser; Winston Tan; Xiao Hong Wang; Zhixin Zhao; Tiantian Zheng; Kemin Zhou; Pan Du; Jianjun Yu; Yong Huang; Shidong Jia; Manish Kohli; Lisa G Horvath; Arun A Azad
Journal:  Eur Urol       Date:  2020-05-30       Impact factor: 20.096

5.  Ultrasensitive detection of tumor-specific mutations in saliva of patients with oral cavity squamous cell carcinoma.

Authors:  Ashwini Shanmugam; Arun K Hariharan; Rifat Hasina; Jayalakshmi R Nair; Shanmukh Katragadda; Sivaraj Irusappan; Aarthi Ravichandran; Vamsi Veeramachaneni; Radhakrishna Bettadapura; Muddasir Bhati; Veena Ramaswamy; Vishal U S Rao; Ritvi K Bagadia; Ashwini Manjunath; N M L Manjunath; Monica Charlotte Solomon; Shiuli Maji; Urvashi Bahadur; Chetan Bettegowda; Nickolas Papadopoulos; Mark W Lingen; Ramesh Hariharan; Vaijayanti Gupta; Nishant Agrawal; Evgeny Izumchenko
Journal:  Cancer       Date:  2020-12-21       Impact factor: 6.860

6.  NETest is superior to chromogranin A in neuroendocrine neoplasia: a prospective ENETS CoE analysis.

Authors:  Anna Malczewska; Kjell Oberg; Beata Kos-Kudla
Journal:  Endocr Connect       Date:  2021-01       Impact factor: 3.335

7.  Multimodal Targeted Deep Sequencing of Circulating Tumor Cells and Matched Cell-Free DNA Provides a More Comprehensive Tool to Identify Therapeutic Targets in Metastatic Breast Cancer Patients.

Authors:  Corinna Keup; Markus Storbeck; Siegfried Hauch; Peter Hahn; Markus Sprenger-Haussels; Oliver Hoffmann; Rainer Kimmig; Sabine Kasimir-Bauer
Journal:  Cancers (Basel)       Date:  2020-04-27       Impact factor: 6.639

8.  Plasma Cell-Free DNA Profiling of PTEN-PI3K-AKT Pathway Aberrations in Metastatic Castration-Resistant Prostate Cancer.

Authors:  Edmond M Kwan; Chao Dai; Heidi Fettke; Christine Hauser; Maria M Docanto; Patricia Bukczynska; Nicole Ng; Siavash Foroughi; Lisa-Jane K Graham; Kate Mahon; Winston Tan; Xiaohong Wang; Zhixin Zhao; Tiantian Zheng; Kemin Zhou; Jianjun Yu; Pan Du; Lisa G Horvath; Shidong Jia; Manish Kohli; Arun A Azad
Journal:  JCO Precis Oncol       Date:  2021-04-06

9.  AR gene rearrangement analysis in liquid biopsies reveals heterogeneity in lethal prostate cancer.

Authors:  Mark Daniel; Todd P Knutson; Jamie M Sperger; Yingming Li; Anupama Singh; Charlotte N Stahlfeld; Courtney Passow; Benjamin Auch; Joshua M Lang; Scott M Dehm
Journal:  Endocr Relat Cancer       Date:  2021-08-11       Impact factor: 5.900

10.  Evaluation of circulating transcript analysis (NETest) in small intestinal neuroendocrine neoplasms after surgical resection.

Authors:  Faidon-Marios Laskaratos; Man Liu; Anna Malczewska; Olagunju Ogunbiyi; Jennifer Watkins; Tu Vinh Luong; Dalvinder Mandair; Martyn Caplin; Christos Toumpanakis
Journal:  Endocrine       Date:  2020-04-14       Impact factor: 3.633

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