Literature DB >> 30700710

Compound-specific radiocarbon dating and mitochondrial DNA analysis of the Pleistocene hominin from Salkhit Mongolia.

Thibaut Devièse1, Diyendo Massilani2, Seonbok Yi3, Daniel Comeskey4, Sarah Nagel5, Birgit Nickel5, Erika Ribechini6, Jungeun Lee3, Damdinsuren Tseveendorj7, Byambaa Gunchinsuren7, Matthias Meyer5, Svante Pääbo5, Tom Higham4.   

Abstract

A skullcap found in the Salkhit Valley in northeast Mongolia is, to our knowledge, the only Pleistocene hominin fossil found in the country. It was initially described as an individual with possible archaic affinities, but its ancestry has been debated since the discovery. Here, we determine the age of the Salkhit skull by compound-specific radiocarbon dating of hydroxyproline to 34,950-33,900 Cal. BP (at 95% probability), placing the Salkhit individual in the Early Upper Paleolithic period. We reconstruct the complete mitochondrial genome (mtDNA) of the specimen. It falls within a group of modern human mtDNAs (haplogroup N) that is widespread in Eurasia today. The results now place the specimen into its proper chronometric and biological context and allow us to begin integrating it with other evidence for the human occupation of this region during the Paleolithic, as well as wider Pleistocene sequences across Eurasia.

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Year:  2019        PMID: 30700710      PMCID: PMC6353915          DOI: 10.1038/s41467-018-08018-8

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  32 in total

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Journal:  Mol Biol Evol       Date:  2010-10-01       Impact factor: 16.240

2.  Patterns of damage in genomic DNA sequences from a Neandertal.

Authors:  Adrian W Briggs; Udo Stenzel; Philip L F Johnson; Richard E Green; Janet Kelso; Kay Prüfer; Matthias Meyer; Johannes Krause; Michael T Ronan; Michael Lachmann; Svante Pääbo
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3.  Single-stranded DNA library preparation for the sequencing of ancient or damaged DNA.

Authors:  Marie-Theres Gansauge; Matthias Meyer
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4.  Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers.

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Journal:  Science       Date:  2017-10-05       Impact factor: 47.728

5.  New protocol for compound-specific radiocarbon analysis of archaeological bones.

Authors:  Thibaut Deviese; Daniel Comeskey; James McCullagh; Christopher Bronk Ramsey; Thomas Higham
Journal:  Rapid Commun Mass Spectrom       Date:  2018-03-15       Impact factor: 2.419

6.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

7.  leeHom: adaptor trimming and merging for Illumina sequencing reads.

Authors:  Gabriel Renaud; Udo Stenzel; Janet Kelso
Journal:  Nucleic Acids Res       Date:  2014-08-06       Impact factor: 16.971

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Journal:  Nature       Date:  2015-06-22       Impact factor: 49.962

9.  HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing.

Authors:  Hansi Weissensteiner; Dominic Pacher; Anita Kloss-Brandstätter; Lukas Forer; Günther Specht; Hans-Jürgen Bandelt; Florian Kronenberg; Antonio Salas; Sebastian Schönherr
Journal:  Nucleic Acids Res       Date:  2016-04-15       Impact factor: 16.971

10.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

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  7 in total

1.  Reevaluating the timing of Neanderthal disappearance in Northwest Europe.

Authors:  Thibaut Devièse; Grégory Abrams; Mateja Hajdinjak; Stéphane Pirson; Isabelle De Groote; Kévin Di Modica; Michel Toussaint; Valentin Fischer; Dan Comeskey; Luke Spindler; Matthias Meyer; Patrick Semal; Tom Higham
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-08       Impact factor: 11.205

2.  The earliest Denisovans and their cultural adaptation.

Authors:  Samantha Brown; Diyendo Massilani; Maxim B Kozlikin; Michael V Shunkov; Anatoly P Derevianko; Alexander Stoessel; Blair Jope-Street; Matthias Meyer; Janet Kelso; Svante Pääbo; Thomas Higham; Katerina Douka
Journal:  Nat Ecol Evol       Date:  2021-11-25       Impact factor: 15.460

3.  A Dynamic 6,000-Year Genetic History of Eurasia's Eastern Steppe.

Authors:  Choongwon Jeong; Ke Wang; Shevan Wilkin; William Timothy Treal Taylor; Bryan K Miller; Jan H Bemmann; Raphaela Stahl; Chelsea Chiovelli; Florian Knolle; Sodnom Ulziibayar; Dorjpurev Khatanbaatar; Diimaajav Erdenebaatar; Ulambayar Erdenebat; Ayudai Ochir; Ganbold Ankhsanaa; Chuluunkhuu Vanchigdash; Battuga Ochir; Chuluunbat Munkhbayar; Dashzeveg Tumen; Alexey Kovalev; Nikolay Kradin; Bilikto A Bazarov; Denis A Miyagashev; Prokopiy B Konovalov; Elena Zhambaltarova; Alicia Ventresca Miller; Wolfgang Haak; Stephan Schiffels; Johannes Krause; Nicole Boivin; Myagmar Erdene; Jessica Hendy; Christina Warinner
Journal:  Cell       Date:  2020-11-05       Impact factor: 41.582

4.  Heading north: Late Pleistocene environments and human dispersals in central and eastern Asia.

Authors:  Feng Li; Nils Vanwezer; Nicole Boivin; Xing Gao; Florian Ott; Michael Petraglia; Patrick Roberts
Journal:  PLoS One       Date:  2019-05-29       Impact factor: 3.240

5.  A Rare Deep-Rooting D0 African Y-Chromosomal Haplogroup and Its Implications for the Expansion of Modern Humans Out of Africa.

Authors:  Marc Haber; Abigail L Jones; Bruce A Connell; Elena Arciero; Huanming Yang; Mark G Thomas; Yali Xue; Chris Tyler-Smith
Journal:  Genetics       Date:  2019-06-13       Impact factor: 4.562

6.  Finding karstic caves and rockshelters in the Inner Asian mountain corridor using predictive modelling and field survey.

Authors:  Patrick Cuthbertson; Tobias Ullmann; Christian Büdel; Aristeidis Varis; Abay Namen; Reimar Seltmann; Denné Reed; Zhaken Taimagambetov; Radu Iovita
Journal:  PLoS One       Date:  2021-01-20       Impact factor: 3.240

7.  After the blades: The late MIS3 flake-based technology at Shuidonggou Locality 2, North China.

Authors:  Peiqi Zhang; Nicolas Zwyns; Fei Peng; Sam C Lin; Corey L Johnson; Jialong Guo; Huiming Wang; Xing Gao
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  7 in total

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