| Literature DB >> 30693156 |
Chandra N Jack1, Shawna L Rowe2, Stephanie S Porter3, Maren L Friesen1,4.
Abstract
PREMISE OF THE STUDY: Current methods for quantifying herbivore-induced alterations in plant biochemistry are often unusable by researchers due to practical constraints. We present a cost-effective, high-throughput protocol to quantify multiple biochemical responses from small plant tissue samples using spectrophotometric techniques. METHODS ANDEntities:
Keywords: microplate; peroxidase; plant defense response; polyphenol oxidase; protease inhibitors; protein quantification
Year: 2019 PMID: 30693156 PMCID: PMC6342235 DOI: 10.1002/aps3.1210
Source DB: PubMed Journal: Appl Plant Sci ISSN: 2168-0450 Impact factor: 1.936
Comparisfectrophotometer and microplate assays for peroxidase (POD) and polyphenol oxidase (PPO) of Solanum lycopersicum plants. By not pooling tissue samples, we are able to decrease replicate experimental error
| Assay | Experimental mean | Experimental SE | ||
|---|---|---|---|---|
| Pre‐herbivory | Post‐herbivory | Pre‐herbivory | Post‐herbivory | |
| POD spectrophotometer | 1.17 | 46.8 | 68.14% | 34.85% |
| POD microplate | 6.31 | 256.47 | 3.34% | 1.97% |
| PPO spectrophotometer | 0.79 | 34.64 | 26.88% | 26.74% |
| PPO microplate | 1.98 | 122.26 | 14.6% | 10.15% |
Values expressed as absorbance per gram fresh weight.
Values expressed as percentage of mean.
Figure 1Comparison of absorbance values for peroxidase (A) and polyphenol oxidase (B) when measured using either a spectrophotometer (cuvette) or microplate reader (mtp) to generate a standard curve using horseradish peroxidase for peroxidase (measured at 470 nm) and mushroom polyphenol oxidase for polyphenol oxidase (measured at 420 nm). Line equations and r 2 values were generated by fitting data using a linear model. Each data point represents mean ± standard error. All concentrations were done in triplicate.
ANCOVA table comparing absorbance values of Solanum lycopersicum tissue samples post‐herbivory using pre‐herbivory absorbance values as a covariate. Using the partial eta squared measure (η 2), we show that differences in absorbance values are mainly due to differences in individual plant responses, which shows that there is significant variation between plants of the same ecotype that were grown in the same environment
| Assay | Grouping variable: Plant | Covariate: Pre‐herbivory value | ||||
|---|---|---|---|---|---|---|
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| Protein quantification | 2897.86 | <0.001 | 0.999 | 0.836 | 0.348 | 0.085 |
| H2O2 | 12177.73 | <0.001 | 0.999 | 0.0816 | 0.782 | 0.009 |
| Peroxidase | 120.46 | <0.001 | 0.982 | 0.463 | 0.513 | 0.049 |
| Polyphenol oxidase | 14.71 | <0.001 | 0.867 | 1.44 | 0.261 | 0.138 |
| Protease inhibitor | 14.5 | 0.012 | 0.935 | 3.981 | 0.117 | 0.499 |
Figure 2Serial dilutions of uninduced Solanum lycopersicum tissue. We serially diluted a homogenized tissue sample initially at a concentration of 0.38 grams fresh weight per milliliter to determine the lower limit of detection for the peroxidase (A) and polyphenol oxidase (B) assays. We used uninduced tissue with low expression of defense compounds and measured absorbance at 470 nm for peroxidase and 420 nm for polyphenol oxidase. Each dilution was measured in triplicate; data points shown are mean ± standard error.
List of buffer conditions for each assay
| Assay | Buffer | Dilution |
|---|---|---|
| Protein quantification | PE | 0.1× |
| Polyphenol oxidase | PE | 0.1× |
| Peroxidase | PE | 0.1× |
| Protease inhibitor | PE | 0.1× |
| Hydrogen peroxide | TCA | 1× |