| Literature DB >> 30691448 |
Abu A M Shazzadur Rahman1, Ivor Langley2, Rafael Galliez3, Afrânio Kritski3, Ewan Tomeny4, S Bertel Squire4.
Abstract
BACKGROUND: Tuberculosis is a major challenge to health in the developing world. Triage prior to diagnostic testing could potentially reduce the volume of tests and costs associated with using the more accurate, but costly, Xpert MTB/RIF assay. An effective methodology to predict the impact of introducing triage prior to tuberculosis diagnostic testing could be useful in helping to guide policy.Entities:
Keywords: Model; Triage; X-ray; Xpert
Mesh:
Year: 2019 PMID: 30691448 PMCID: PMC6348624 DOI: 10.1186/s12879-019-3684-1
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Fig. 1Example screenshot of operational model of TB diagnostics in Porte Alegre. The screen shot of the model illustrates presumptive-TB cases arriving at 1 of 10 health clinics where they undergo the triage test followed in some cases by X-ray. Patients who are triage positive then proceed for sputum collection. When microscopy is used for diagnosis the patients then go home and return the next day with a second sputum sample. Sputum samples are tested in the laboratory using either microscopy or Xpert MTB/RIF. A red patient icon indicates the patient has active TB and a green icon indicates a patient with no TB. Sputum samples and results are shown as circles. Circles with brown centres represent initiation of the diagnostic test and TB positivity unknown, red and yellow centres indicate samples that tested positive and negative respectively. Patients who are tested positive, undertake initiation of TB treatment and those who are tested negative go for clinical assessment and then TB treatment if clinically diagnosed. Some patients are also shown as lost to follow up (LTFU) and no treatment is initiated. Three types of resources are also shown in the model to represent Clinicians (Orange and Black), Nurses (Pink and Yellow) and Lab Assistants (Green and Brown)
Input data
| Parameter | Value (95% CI) | Source |
|---|---|---|
| Mean number of presumptive TB cases per day | 44 (34,55) | Data collated from primary health care facilities in Porto Alegre for the PROVE-IT trial [ |
| TB prevalence amongst presumptive-TB cases | 15.8% (14.6, 17.0%) | |
| HIV prevalence in TB cases | 44.8% (40.4, 49.2%) | |
| HIV prevalence in no TB cases | 27.3% (25.8, 28.8%) | |
| Sensitivity - Smear microscopy for HIV-positive | 45% (38, 52%) | Boehme |
| Specificity - Smear microscopy for HIV-positive | 100% (99, 100%) | |
| Sensitivity - Smear microscopy for HIV-negative | 72% (69, 75%) | |
| Specificity - Smear microscopy for HIV-negative | 99% (99, 100%) | |
| Sensitivity - Xpert for HIV-positive | 82% (77, 87%) | |
| Specificity - Xpert for HIV-positive | 99% (98, 100%) | |
| Sensitivity - Xpert for HIV-negative | 92% (90, 94%) | |
| Specificity - Xpert for HIV-negative | 99% (98, 99%) | |
| Sensitivity - Clinical judgement for HIV-positive | 49% | Estimated from reported TB case volumes in Porto Alegre and assumed sensitivity/specificity of Smear microscopy |
| Specificity - Clinical judgement for HIV-positive | 90% | |
| Sensitivity - Clinical judgement for HIV-negative | 77% | |
| Specificity - Clinical judgement for HIV-negative | 90% | |
| Sensitivity of X-ray for abnormalities suggestive of active TB | 87% (79, 95%) | WHO [ |
| Specificity of X-ray for abnormalities suggestive of active TB | 89% (87, 92%) | |
| Estimated unit cost per test – Microscopy | US$7.20 | Estimates provided by TB research staff working with the TB program in Porto Alegre |
| Estimated unit cost per test – Xpert | US$ 17.80 | |
| Estimated unit cost per test – X-ray | US$ 6.00 | |
| Estimated % of presumptive-TB cases LTFU | 10.0% | |
| Estimated cost to treat TB case in Brazil | US$840 | Laurence |
| Estimated cost to treat MDR-TB in Brazil | US$6313 |
Optional Triage approaches and key characteristic assumptions
| Triage label | Description of triage approach | Sensitivity | Specificity | Additional cost per testb |
|---|---|---|---|---|
| T1- Base case | No triage | |||
| T2- Cough 1 week | Respiratory symptom of cough > 1 week [ | 88% | 19% | US$0 |
| T3 Cough 3 weeks | Respiratory symptom of cough > 3 weeks [ | 61% | 51% | US$0 |
| T4- Clinical Score | Scorecard based on aggregating scores assigned to respiratory symptoms including chest pain, cough, sputum expectoration, hemoptysis, night sweats, fever, shortness of breath and weight loss [ | 83% | 52% | US$2 |
| T5- ANN | Artificial Neural Network (ANN) based on using a multilayer perceptron (MLP) approach [ | 98%a | 32%a | US$2 |
| T6- TPP (optimal) | A theoretical optimal target product profile (TPP) as proposed by Denkinger et al. [ | 95% | 80% | US$2 |
| T7- TPP (minimal) | A theoretical target product profile (TPP) with the minimum characteristics required to be useful as proposed by Denkinger et al. [ | 90% | 70% | US$2 |
athe sensitivity and specificity figures are taken from unpublished research in Brazil
bThe additional cost per triage test is assumed to be low as the characteristics are those which clinicians will already consider today. An additional allowance (US$2) has been made if some computation is required in line with the costs proposed by Denkinger et al [20] for the TPP’s
Fig. 2Alternative presumptive-TB algorithms for triage and X-ray prior to TB diagnostic testing
Model projections with Xpert as the diagnostic tool for each triage option when no X-ray available for triage (Fig. 1a). (Base Case – Microscopy diagnostic tool and no triage)
| Diagnostic & triage options | Presumptive TB cases receiving diagnostic test per yr. | True TB cases b starting treatment per year and case detection % c | False TB cases d starting TB treatment per year | Time between starting triage and receiving diagnosis (days) | Additional true TB cases starting treatment over base case per year a | Additional cost compared to base case per year a (US$ 000 s) | Cost per additional true TB patient diagnosed and treated n(US$) a |
|---|---|---|---|---|---|---|---|
| Microscopy No Triage (base case) | 10,281 | 1238 75% | 543 | 6.0 | 0 | 0 | 0 |
| Xpert No Triage | 10,284 | 1375 83% | 419 | 5.0 | 137 (57, 217) | 581 (555, 607) | 4242 (1372, 7111) |
| Xpert T2 Cough 1wk | 8411 | 1197 72% | 340 | 4.0 | −41 (−118, 36) | 233 (223, 244) | No benefit over base |
| Xpert T3 Cough>3wks | 5183 | 878 53% | 193 | 2.4 | −360 (− 439, −281) | − 393 (− 410, − 375) | No benefit over base |
| Xpert T4 Clinical score | 5470 | 1148 70% | 191 | 2.5 | −90 (−166, −14) | −51 (−53, −49) | No benefit over base |
| Xpert T5 ANN | 7469 | 1369 82% | 285 | 3.5 | 131 (39, 223) | 367 (351, 384) | 2805 (907, 4703) |
| Xpert T6 TPP optimal | 3290 | 1320 80% | 75 | 1.5 | 82 (2, 162) | −49 (−52, −47) | − 604 (−1012, − 195) |
| Xpert T7 TPP minimal | 4046 | 1245 76% | 121 | 1.8 | 7 (−74, 88) | −54 (−56, −52) | Minimal benefit over base case |
aNumbers in brackets represent 95% confidence limits
bTrue TB cases include both bacteriologically confirmed and clinically diagnosed cases that have TB
cCase detection rate calculated as the number of true TB cases identified through the complete triage and diagnostic algorithm, divided by the number of TB cases in the presumptive-TB case population calculated from the assumed TB prevalence (Table 2)
dFalse TB cases are individuals diagnosed with TB and placed on TB treatment, but do not have TB (false positives)
Fig. 3Projections on the impacts of implementing alternative triage approaches (T2-T7) Impacts shown are on health system costs (X-axis), additional cost per additional TB patient starting treatment (Y-axis) and number of additional TB patients starting treatment (size of circle). Graph A is impact of triage without X-ray. Graph B is impact of triage with X-ray
Model projections with Xpert as the diagnostic tool for each triage option with X-ray available for triage (Fig. 1b). (Base Case – Microscopy diagnostic tool and no triage)
| Diagnostic & triage options | Presumptive TB cases receiving diagnostic test per yr. | True TB cases b starting treatment per year and case detection c % | False TB cases d starting TB treatment per year | Time between starting triage and receiving diagnosis (days) | Additional true TB cases starting treatment over base case per year a | Additional cost compared to base case per year a (US$ 000 s) | Cost per additional true TB patient diagnosed and treated (US$) a |
|---|---|---|---|---|---|---|---|
| Microscopy No Triage (base case) | 10,281 | 1238 75% | 543 | 6.0 | 0 | 0 | 0 |
| Xpert No Triage | 10,284 | 1375 83% | 419 | 5.0 | 137 (57, 217) | 581 (555, 607) | 4242 (1372, 7111) |
| Xpert T2 Cough 1wk | 9204 | 1370 83% | 401 | 4.4 | 132 (54, 210) | 536 (512, 559) | 4057 (1313, 6802) |
| Xpert T3 Cough>3wks | 7340 | 1290 80% | 289 | 3.5 | 52 (−15, 119) | 278 (266, 290) | 5345 (1729, 8960) |
| Xpert T4 Clinical score | 7365 | 1353 82% | 296 | 3.5 | 114 (38, 190) | 380 (363, 397) | 3331 (1078, 5584) |
| Xpert T5 ANN | 8477 | 1352 82% | 341 | 4.0 | 114 (43, 187) | 451 (431, 470) | 3952 (1278, 6625) |
| Xpert T6 TPP optimal | 5823 | 1354 82% | 218 | 2.8 | 116 (45, 187) | 172 (164, 179) | 1481 (479, 2483) |
| Xpert T7 TPP minimal | 6367 | 1366 83% | 231 | 3.1 | 128 (56, 200) | 301 (287, 314) | 2349 (760, 3938) |
aNumbers in brackets represent 95% confidence limits
bTB cases include both bacteriologically confirmed and clinically diagnosed cases that have TB
cCase detection rate was calculated as the number of true TB cases identified through the complete triage and diagnostic algorithm, divided by the number of TB cases in the presumptive-TB case population calculated from the assumed TB prevalence (Table 2)
dFalse TB cases are individuals diagnosed with TB and placed on TB treatment, but do not have TB (false positives)