Literature DB >> 30690447

Floodplain soil and its bacterial composition are strongly affected by depth.

Kristin Steger1, Amy Taeyen Kim2, Lars Ganzert3,4,5, Hans-Peter Grossart3,6, David R Smart1.   

Abstract

We studied bacterial abundance and community structure of five soil cores using high-throughput sequencing of the 16S rRNA gene. Shifts in the soil bacterial composition were more pronounced within a vertical profile than across the landscape. Soil organic carbon (SOC) and nitrogen (N) concentrations decreased exponentially with soil depth and revealed a buried carbon-rich horizon between 0.8 and 1.3 m across all soil cores. This buried horizon was phylogenetically similar to its surrounding subsoils supporting the idea that the type of carbon, not necessarily the amount of carbon was driving the apparent similarities. In contrast to other studies, Nitrospirae was one of our major phyla with relatively high abundances throughout the soil profile except for the surface soil. Although depth is the major driver shaping soil bacterial community structure, positive correlations with SOC and N concentrations, however, were revealed with the bacterial abundance of Acidobacteria, one of the major, and Gemmatimonadetes, one of the minor phyla in our study. Our study showed that bacterial diversity in soils below 2.0 m can be still as high if not higher than in the above laying subsurface soil suggesting that various bacteria throughout the soil profile influence major biogeochemical processes in floodplain soils. © FEMS 2019.

Entities:  

Keywords:  zzm321990 Nitrospiraezzm321990 ; 16S rRNA gene sequencing; SOC; alluvial soil; buried horizon; soil bacterial diversity

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Year:  2019        PMID: 30690447     DOI: 10.1093/femsec/fiz014

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  2 in total

1.  The Effects of Soil Depth on the Structure of Microbial Communities in Agricultural Soils in Iowa, USA.

Authors:  Jingjie Hao; Yen Ning Chai; Lucas Dantas Lopes; Raziel A Ordóñez; Emily E Wright; Sotirios Archontoulis; Daniel P Schachtman
Journal:  Appl Environ Microbiol       Date:  2020-12-11       Impact factor: 4.792

2.  Biomonitoring and assessment of toxic element contamination in floodplain sediments and soils using fluorescein diacetate (FDA) enzymatic activity measurements: evaluation of possibilities and limitations through the case study of the Drava River floodplain.

Authors:  Péter Szabó; Gyozo Jordan; Tamás Kocsis; Katalin Posta; Levente Kardos; Robert Šajn; Jasminka Alijagić
Journal:  Environ Monit Assess       Date:  2022-08-03       Impact factor: 3.307

  2 in total

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