Literature DB >> 30689861

The TFAP2A-IRF6-GRHL3 genetic pathway is conserved in neurulation.

Youssef A Kousa1,2,3, Huiping Zhu4, Walid D Fakhouri5, Yunping Lei4, Akira Kinoshita6, Raeuf R Roushangar1, Nicole K Patel7, A J Agopian8, Wei Yang9, Elizabeth J Leslie10, Tamara D Busch11, Tamer A Mansour12,13,14, Xiao Li15, Arianna L Smith12, Edward B Li16,17, Dhruv B Sharma18, Trevor J Williams19, Yang Chai20, Brad A Amendt15, Eric C Liao16,17, Laura E Mitchell8, Alexander G Bassuk11, Simon Gregory21, Allison Ashley-Koch21, Gary M Shaw9, Richard H Finnell4, Brian C Schutte1,7,12,22.   

Abstract

Mutations in IRF6, TFAP2A and GRHL3 cause orofacial clefting syndromes in humans. However, Tfap2a and Grhl3 are also required for neurulation in mice. Here, we found that homeostasis of Irf6 is also required for development of the neural tube and associated structures. Over-expression of Irf6 caused exencephaly, a rostral neural tube defect, through suppression of Tfap2a and Grhl3 expression. Conversely, loss of Irf6 function caused a curly tail and coincided with a reduction of Tfap2a and Grhl3 expression in tail tissues. To test whether Irf6 function in neurulation was conserved, we sequenced samples obtained from human cases of spina bifida and anencephaly. We found two likely disease-causing variants in two samples from patients with spina bifida. Overall, these data suggest that the Tfap2a-Irf6-Grhl3 genetic pathway is shared by two embryologically distinct morphogenetic events that previously were considered independent during mammalian development. In addition, these data suggest new candidates to delineate the genetic architecture of neural tube defects and new therapeutic targets to prevent this common birth defect. Published by Oxford University Press 2019.

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Year:  2019        PMID: 30689861      PMCID: PMC6494790          DOI: 10.1093/hmg/ddz010

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  63 in total

1.  Requirement for AP-2alpha in cardiac outflow tract morphogenesis.

Authors:  Stephanie Brewer; Xiaobing Jiang; Stephanie Donaldson; Trevor Williams; Henry M Sucov
Journal:  Mech Dev       Date:  2002-01       Impact factor: 1.882

2.  Identification and analysis of a conserved Tcfap2a intronic enhancer element required for expression in facial and limb bud mesenchyme.

Authors:  Weiguo Feng; Jian Huang; Jian Zhang; Trevor Williams
Journal:  Mol Cell Biol       Date:  2007-11-05       Impact factor: 4.272

3.  A pituitary homeobox 2 (Pitx2):microRNA-200a-3p:β-catenin pathway converts mesenchymal cells to amelogenin-expressing dental epithelial cells.

Authors:  Thad Sharp; Jianbo Wang; Xiao Li; Huojun Cao; Shan Gao; Myriam Moreno; Brad A Amendt
Journal:  J Biol Chem       Date:  2014-08-13       Impact factor: 5.157

4.  Grainyhead-like 2 regulates neural tube closure and adhesion molecule expression during neural fold fusion.

Authors:  Christina Pyrgaki; Aimin Liu; Lee Niswander
Journal:  Dev Biol       Date:  2011-03-04       Impact factor: 3.582

5.  Genetic association analyses of nitric oxide synthase genes and neural tube defects vary by phenotype.

Authors:  Karen L Soldano; Melanie E Garrett; Heidi L Cope; J Michael Rusnak; Nathen J Ellis; Kaitlyn L Dunlap; Marcy C Speer; Simon G Gregory; Allison E Ashley-Koch
Journal:  Birth Defects Res B Dev Reprod Toxicol       Date:  2013-12-09

Review 6.  Toward an orofacial gene regulatory network.

Authors:  Youssef A Kousa; Brian C Schutte
Journal:  Dev Dyn       Date:  2015-09-17       Impact factor: 3.780

7.  Novel mutations in VANGL1 in neural tube defects.

Authors:  Zoha Kibar; Ciprian M Bosoi; Megan Kooistra; Sandra Salem; Richard H Finnell; Patrizia De Marco; Elisa Merello; Alexander G Bassuk; Valeria Capra; Philippe Gros
Journal:  Hum Mutat       Date:  2009-07       Impact factor: 4.878

8.  Mutations in IRF6 cause Van der Woude and popliteal pterygium syndromes.

Authors:  Shinji Kondo; Brian C Schutte; Rebecca J Richardson; Bryan C Bjork; Alexandra S Knight; Yoriko Watanabe; Emma Howard; Renata L L Ferreira de Lima; Sandra Daack-Hirsch; Achim Sander; Donna M McDonald-McGinn; Elaine H Zackai; Edward J Lammer; Arthur S Aylsworth; Holly H Ardinger; Andrew C Lidral; Barbara R Pober; Lina Moreno; Mauricio Arcos-Burgos; Consuelo Valencia; Claude Houdayer; Michel Bahuau; Danilo Moretti-Ferreira; Antonio Richieri-Costa; Michael J Dixon; Jeffrey C Murray
Journal:  Nat Genet       Date:  2002-09-03       Impact factor: 38.330

9.  PREMIM and EMIM: tools for estimation of maternal, imprinting and interaction effects using multinomial modelling.

Authors:  Richard Howey; Heather J Cordell
Journal:  BMC Bioinformatics       Date:  2012-06-27       Impact factor: 3.169

10.  Identification of novel CELSR1 mutations in spina bifida.

Authors:  Yunping Lei; Huiping Zhu; Wei Yang; M Elizabeth Ross; Gary M Shaw; Richard H Finnell
Journal:  PLoS One       Date:  2014-03-14       Impact factor: 3.240

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  14 in total

Review 1.  Genetics and signaling mechanisms of orofacial clefts.

Authors:  Kurt Reynolds; Shuwen Zhang; Bo Sun; Michael A Garland; Yu Ji; Chengji J Zhou
Journal:  Birth Defects Res       Date:  2020-07-15       Impact factor: 2.344

2.  Epithelial Migration and Non-adhesive Periderm Are Required for Digit Separation during Mammalian Development.

Authors:  Ghaidaa Kashgari; Lina Meinecke; William Gordon; Bryan Ruiz; Jady Yang; Amy Lan Ma; Yilu Xie; Hsiang Ho; Maksim V Plikus; Qing Nie; James V Jester; Bogi Andersen
Journal:  Dev Cell       Date:  2020-02-27       Impact factor: 12.270

3.  Genome-wide Enrichment of De Novo Coding Mutations in Orofacial Cleft Trios.

Authors:  Madison R Bishop; Kimberly K Diaz Perez; Miranda Sun; Samantha Ho; Pankaj Chopra; Nandita Mukhopadhyay; Jacqueline B Hetmanski; Margaret A Taub; Lina M Moreno-Uribe; Luz Consuelo Valencia-Ramirez; Claudia P Restrepo Muñeton; George Wehby; Jacqueline T Hecht; Frederic Deleyiannis; Seth M Weinberg; Yah Huei Wu-Chou; Philip K Chen; Harrison Brand; Michael P Epstein; Ingo Ruczinski; Jeffrey C Murray; Terri H Beaty; Eleanor Feingold; Robert J Lipinski; David J Cutler; Mary L Marazita; Elizabeth J Leslie
Journal:  Am J Hum Genet       Date:  2020-06-22       Impact factor: 11.025

4.  Interferon regulatory factor 6 is required for proper wound healing in vivo.

Authors:  Lindsey Rhea; Franklin J Canady; Marc Le; Tanner Reeb; John W Canady; Deborah S F Kacmarynski; Rishika Avvari; Leah C Biggs; Martine Dunnwald
Journal:  Dev Dyn       Date:  2019-12-02       Impact factor: 2.842

Review 5.  Neuronal Migration Generates New Populations of Neurons That Develop Unique Connections, Physiological Properties and Pathologies.

Authors:  Bernd Fritzsch; Karen L Elliott; Gabriela Pavlinkova; Jeremy S Duncan; Marlan R Hansen; Jennifer M Kersigo
Journal:  Front Cell Dev Biol       Date:  2019-04-24

6.  Meta-Analysis of Grainyhead-Like Dependent Transcriptional Networks: A Roadmap for Identifying Novel Conserved Genetic Pathways.

Authors:  Nishanthi Mathiyalagan; Lee B Miles; Peter J Anderson; Tomasz Wilanowski; Brian L Grills; Stuart J McDonald; M Cristina Keightley; Agata Charzynska; Michal Dabrowski; Sebastian Dworkin
Journal:  Genes (Basel)       Date:  2019-10-31       Impact factor: 4.096

Review 7.  Molecular Pathways Modulating Sensory Hair Cell Regeneration in Adult Mammalian Cochleae: Progress and Perspectives.

Authors:  Vikrant Rai; Shu Tu; Joseph R Frank; Jian Zuo
Journal:  Int J Mol Sci       Date:  2021-12-22       Impact factor: 5.923

8.  SPECC1L regulates palate development downstream of IRF6.

Authors:  Everett G Hall; Luke W Wenger; Nathan R Wilson; Sraavya S Undurty-Akella; Jennifer Standley; Eno-Abasi Augustine-Akpan; Youssef A Kousa; Diana S Acevedo; Jeremy P Goering; Lenore Pitstick; Nagato Natsume; Shahnawaz M Paroya; Tamara D Busch; Masaaki Ito; Akihiro Mori; Hideto Imura; Laura E Schultz-Rogers; Eric W Klee; Dusica Babovic-Vuksanovic; Sarah A Kroc; Wasiu L Adeyemo; Mekonen A Eshete; Bryan C Bjork; Satoshi Suzuki; Jeffrey C Murray; Brian C Schutte; Azeez Butali; Irfan Saadi
Journal:  Hum Mol Genet       Date:  2020-03-27       Impact factor: 5.121

9.  In-frame deletion of SPECC1L microtubule association domain results in gain-of-function phenotypes affecting embryonic tissue movement and fusion events.

Authors:  Jeremy P Goering; Luke W Wenger; Marta Stetsiv; Michael Moedritzer; Everett G Hall; Dona Greta Isai; Brittany M Jack; Zaid Umar; Madison K Rickabaugh; Andras Czirok; Irfan Saadi
Journal:  Hum Mol Genet       Date:  2021-12-17       Impact factor: 5.121

10.  An Irf6-Esrp1/2 regulatory axis controls midface morphogenesis in vertebrates.

Authors:  Shannon H Carroll; Claudio Macias Trevino; Edward B Li; Kenta Kawasaki; Nikita Myers; Shawn A Hallett; Nora Alhazmi; Justin Cotney; Russ P Carstens; Eric C Liao
Journal:  Development       Date:  2020-12-23       Impact factor: 6.862

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