Literature DB >> 30687882

Biogeography and Diversity of Freshwater Bacteria on a River Catchment Scale.

Jie Liu1,2, Teng Tu1,3, Guanghai Gao1, Mark Bartlam4, Yingying Wang5.   

Abstract

To illustrate how freshwater bacterial community changes with geographic gradient, we investigated the spatial changes of bacterial abundance and community structures from over 200 samples on a catchment scale in the Songhua River using heterotrophic plate counts, flow cytometry, denaturing gradient gel electrophoresis, and pyrosequencing analysis. The results showed that the mainstream had higher cultivable bacteria and total bacterial concentration than tributaries in the Songhua River catchment. Response model analysis demonstrated that the bacterial community exhibits a biogeographical signature even in an interconnected river network system, and the total bacterial concentration and biodiversity were significantly correlated to latitude (p < 0.001) and longitude (p < 0.001). Multivariate redundancy analysis indicated that temperature was the most important factor driving bacterial community structure in the Songhua River, which accounts for 35.30% variance of communities, then dissolved oxygen (17.60%), latitude (17.60%), longitude (11.80%), and pH (5.88%). High-throughput pyrosequencing revealed that at the phylum level, Proteobacteria was numerically dominant (89.6%) in river catchment, followed by Bacteroidetes (8.1%) and Cyanobacteria (1.2%). The overall results revealed that the bacterial community was driven by geographical distance regardless of the continuum of the river on a catchment scale.

Entities:  

Keywords:  Biodiversity; Biogeography; Freshwater bacteria; High-throughput sequencing

Mesh:

Year:  2019        PMID: 30687882     DOI: 10.1007/s00248-019-01323-9

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  52 in total

1.  Global dispersal of free-living microbial eukaryote species.

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2.  Cytoscape: a software environment for integrated models of biomolecular interaction networks.

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3.  Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis.

Authors:  Hiroyuki Sekiguchi; Masataka Watanabe; Tadaatsu Nakahara; Baohua Xu; Hiroo Uchiyama
Journal:  Appl Environ Microbiol       Date:  2002-10       Impact factor: 4.792

4.  Bacterial community succession in natural river biofilm assemblages.

Authors:  Emilie Lyautey; Colin R Jackson; Jérôme Cayrou; Jean-Luc Rols; Frédéric Garabétian
Journal:  Microb Ecol       Date:  2005-12-15       Impact factor: 4.552

5.  The diversity and biogeography of soil bacterial communities.

Authors:  Noah Fierer; Robert B Jackson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-09       Impact factor: 11.205

6.  The power of species sorting: local factors drive bacterial community composition over a wide range of spatial scales.

Authors:  Katleen Van der Gucht; Karl Cottenie; Koenraad Muylaert; Nele Vloemans; Sylvie Cousin; Steven Declerck; Erik Jeppesen; Jose-Maria Conde-Porcuna; Klaus Schwenk; Gabriel Zwart; Hanne Degans; Wim Vyverman; Luc De Meester
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-11       Impact factor: 11.205

7.  Salt marsh sediment bacteria: their distribution and response to external nutrient inputs.

Authors:  Jennifer L Bowen; Byron C Crump; Linda A Deegan; John E Hobbie
Journal:  ISME J       Date:  2009-05-07       Impact factor: 10.302

Review 8.  Microbial community structure and its functional implications.

Authors:  Jed A Fuhrman
Journal:  Nature       Date:  2009-05-14       Impact factor: 49.962

9.  Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands.

Authors:  Simone I Böer; Stefanie I C Hedtkamp; Justus E E van Beusekom; Jed A Fuhrman; Antje Boetius; Alban Ramette
Journal:  ISME J       Date:  2009-04-02       Impact factor: 10.302

10.  Water quality and health status of the Senegal River estuary.

Authors:  M Troussellier; P Got; M Bouvy; M M'Boup; R Arfi; F Lebihan; P Monfort; D Corbin; C Bernard
Journal:  Mar Pollut Bull       Date:  2004-05       Impact factor: 5.553

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