Literature DB >> 30678728

The association of functional polymorphisms in genes expressed in endothelial cells and smooth muscle cells with the myocardial infarction.

Yilan Li1,2, Shipeng Wang1,2, Dandan Zhang1,2, Xueming Xu1, Bo Yu1,2, Yao Zhang3,4.   

Abstract

BACKGROUND: The association of platelet endothelial cell adhesion molecule 1 (PECAM1), hypoxia-inducible factor 1 subunit alpha (HIF1A), and KIAA1462 in myocardial infarction (MI) was investigated. The study included 401 Han Chinese MI patients and 409 controls. Three tag single-nucleotide polymorphisms (SNPs)-PECAM1 rs1867624, HIF1A rs2057482, and KIAA1462 rs3739998-were selected. SNP genotyping was performed by an improved multiplex ligation detection reaction assay. A systematic review and meta-analysis of studies including 3314 cases and 2687 controls on the association of 5 HIF1A SNPs and the overall risk of MI or coronary artery disease (CAD) was performed.
RESULTS: The rs1867624 variants were associated with high TG concentrations (p = 0.040) and the rs2057482 variants were associated with decreased HDL-C in MI patients compared with the control group (p = 0.003). Rs2057482 SNP interacted with age to influence TC levels. The SNP of rs3739998 interacted with sex and hypertension to modulate CRE and TG levels, respectively (p < 3.04E-5-0.002). No association between the three SNPs and susceptibility to MI was found (p > 0.05 for all). In the meta-analysis of HIF1A, the rs11549465 C > T and rs10873142 T > C polymorphisms, but not rs2057482, rs11549467, and rs41508050, were correlated with overall MI or CAD risk.
CONCLUSIONS: Taken together, this study provides additional evidence that genetic variation of the PECAM1 rs1867624 and HIF1A rs2057482 can mediate lipid levels in MI patients.

Entities:  

Keywords:  Coronary artery disease; HIF1A; KIAA1462; Myocardial infarction; PECAM1; Single-nucleotide polymorphism

Mesh:

Substances:

Year:  2019        PMID: 30678728      PMCID: PMC6345039          DOI: 10.1186/s40246-018-0189-8

Source DB:  PubMed          Journal:  Hum Genomics        ISSN: 1473-9542            Impact factor:   4.639


Background

Coronary artery disease (CAD) is a complex, multifactorial, and polygenic disorder caused by an excessive inflammatory response to various forms of injury, resulting in endothelial dysfunction in the arterial walls leading to accelerated atherosclerosis [1]. In the blood vessel wall, the basement membrane underlies the endothelium and surrounds smooth muscle cells (SMCs) [2]. The basement membrane not only serves as an extracellular scaffold but also regulates cell behavior [3]. Abnormalities of vascular endothelial cells (ECs) and SMCs play important roles in the pathogenesis of atherosclerosis, the vascular pathology underlying CAD [4]. The recent targeted gene array derived from earlier genome-wide association studies (GWAS) results and performed meta-analysis of results have made huge advances in identifying genetic components of CAD risk with 15 mainly novel risk loci, including single-nucleotide polymorphisms (SNPs) in or near genes involved in major lipids, blood pressure, and vascular smooth muscle cell differentiation [5]. Several of these have been validated by large-scale association studies [6, 7]. However, the functional relationship between many of these loci and the risk of coronary heart disease (CAD)/myocardial infarction (MI) remains to be determined [8]. Three of the new CAD-associated regions identified in the current analysis include genes that encode proteins expressed in smooth muscle cells (PECAM1, HIF1A) and endothelial cells (KIAA1462). Rs1867624 is upstream of PECAM1, which encodes platelet endothelial cell adhesion molecule 1, a cell adhesion protein that play a role in endothelial cell sprouting [9]. It helps leukocytes adhere to the endothelium and migrate into the intima layer of the artery [10]. Reschner et al. have demonstrated the association between PECAM1*L/L genotype and MI in Slovenian population [11]. Serebruany at al. determined plasma levels of PECAM-1 and prospectively compare these data with the discharge diagnosis in patients presenting with chest pain in a community hospital emergency department [12]. Levels of soluble PECAM-1 were increased in patients with AMI. Wenzel et al. investigated two polymorphisms (Leu125Val and Ser563Asn) in 98 patients with coronary artery stenoses and 103 healthy controls [13]. Both the variants were more frequent in patients as was the homozygous combination Val125/Asn563 (0.43 vs 0.2). Together, these findings prioritize PECAM1 as a candidate causal gene for this CAD-associated region in humans. HIF1A is a transcriptional factor encoded by the HIF1A gene located on chromosome 14 (14q23.2) and plays a critical role in the regulation of different cellular processes involved in the preservation of oxygen homeostasis [1]. Imanishi et al. show that hypoxia-inducible factor-1α (Hif-1α) expressed in smooth muscle cells is involved in angiotensin II (Ang II)-induced vascular remodeling in an in vivo model [14]. Alberto et al. suggested that rs2057482 polymorphism is involved in the risk of developing CAD and is associated with some metabolic parameters and cardiovascular risk factors. The rs2057482 T allele was associated with decreased risk of obesity, central obesity, hypertension, hypercholesterolemia, hypertriglyceridemia, and increased risk of T2DM [1]. Guo et al. showed that the genetic mutations within HIF-1A (rs2057482) could alter susceptibility to perimenopausal CAD [15]. KIAA1462 is newly identified locus, which is associated with coronary artery disease, the KIAA1462 protein participates in the regulation of adherens junctions and cytoskeleton formation in endothelial cells [16]. Thus, it is involved in the support of integrity and permeability of the endothelium, which is always exposed to the mechanical action of blood flow. In turn, the endothelium permeability affects the migration rate of monocytes, which morph into macrophages that favor the formation and development of atherosclerotic plaques [17]. The G allele at rs3739998 leads to a missense variant (Ser1002Thr) which is located in exon 3 of the KIAA1462 gene [18]. Akashi et al. also independently identified junctional protein associated with coronary artery disease (JCAD), which is a gene product of KIAA1462 through localization-based expression cloning of novel junctional proteins [19]. In light of previous studies, we selected three genes expressed in smooth muscle cells and one endothelial-related gene and aimed to test their contribution to the risk of MI in Han Chinese.

Results

Population characteristics

The clinical characteristics of the 810 study participants are shown in Table 1. The majority (82.0%) were men (60.3%) were current smokers, and 26.2% drank alcohol. The hypercholesterolemia and triglycerides levels were not different between controls and MI patients (p > 0.05 for all). The MI patients had higher smoking, alcohol, diabetes, hypertension, WBC, FBG, CRE, AST, total cholesterol, but lower HDL cholesterol and LDL cholesterol.
Table 1

Baseline characteristics of the individuals included in the study

VariablesMI (n = 401)Controls (n = 409)OR (95% CI)ap valueb
Age, years58.20 (11.65)56.34 (9.52)0.84 (0.75-1.24)0.223
Male sex, No. (%)329 (82.0%)339 (82.9%)0.94 (0.66- 1.36)0.753
Smoking, No. (%)242 (60.3%)187 (45.7%)0.56 (0.37-0.72)3.04E-05c
Alcohol, No. (%)105 (26.2%)82 (20.0%)0.62 (0.39-0.82)0.038
Diabetes, No. (%)99 (26.7%)50 (12.2%)0.43 (0.29-0.62)4.71E-06
Hypertension, No. (%)192 (47.9%)143 (35.0%)0.59 (0.44-0.78)1.90E-4
Hypercholesterolemia, No. (%)55 (13.7%)39 (9.5%)0.66 (0.43-1.03)0.063
WBC, 109/L11.96 (3.81)6.84 (1.90)1.93 (1.76-2.12)1.78E-80
FBG, mmol/L6.44 (5.10, 8.88)5.34 (4.93, 6.04)1.15 (1.09-1.21)1.25E-7
CRE, μmol/L81.00 (69.00, 95.30)71.00 (62.00, 80.00)1.04 (1.03-1.05)3.22E-18
AST, U/L37.00 (22.00, 117.50)24.00 (20.00, 28.00)1.04 (1.03-1.05)2.54E-32
Total cholesterol, mmol/L4.56 (1.05)4.96 (0.84)0.65 (0.56-0.76)7.03E-9
Triglycerides, mmol/L1.38 (0.95,1.93)1.32 (0.92, 2.02)0.99 (0.88-1.11)0.764
HDL cholesterol, mmol/L1.23 (1.06, 1.43)1.31 (1.13, 1.52)0.50 (0.33-0.75)1.65E-3
LDL cholesterol, mmol/L2.77 (0.83)3.30 (0.73)0.44 (0.36-0.53)1.92E-20

Values are mean ± SD or n (%), continuous variables that have skewed distribution are expressed as median (25, 75 percentiles)

Type 2 diabetes was diagnosed: (1) fasting plasma glucose (FPG) ≥ 7.0 mmol/L; (2) 2 h postprandial glucose ≥ 11.1 mmol/L; or (3) use of anti-diabetic medications. Hypertension was defined as systolic/diastolic blood pressure ≥ 140 mmHg or ≥ 90 mmHg or use of antihypertensive medications. Hypercholesterolemia was defined as use of cholesterol-lowering medications or total serum cholesterol > 200 mg/dl. WBC white blood cell, FBG fasting blood glucose, AST aspartate transaminase, CRE creatinine, HDL high-density lipoprotein, LDL low-density lipoprotein

aBinary regression

bTwo-sided chi-square test or independent-samples 푡 test

cp values under 0.05 were shown in italic font

Baseline characteristics of the individuals included in the study Values are mean ± SD or n (%), continuous variables that have skewed distribution are expressed as median (25, 75 percentiles) Type 2 diabetes was diagnosed: (1) fasting plasma glucose (FPG) ≥ 7.0 mmol/L; (2) 2 h postprandial glucose ≥ 11.1 mmol/L; or (3) use of anti-diabetic medications. Hypertension was defined as systolic/diastolic blood pressure ≥ 140 mmHg or ≥ 90 mmHg or use of antihypertensive medications. Hypercholesterolemia was defined as use of cholesterol-lowering medications or total serum cholesterol > 200 mg/dl. WBC white blood cell, FBG fasting blood glucose, AST aspartate transaminase, CRE creatinine, HDL high-density lipoprotein, LDL low-density lipoprotein aBinary regression bTwo-sided chi-square test or independent-samples 푡 test cp values under 0.05 were shown in italic font

Genotype and allele frequencies in patients and controls

The genotype and allele frequencies of three SNPs selected for study are shown in Table 2. The selected SNPs all displayed a MAF > 0.05 and the allele frequencies were similar to observations derived from the pooled sample, according to 1000 Genomes (rs1867624, C = 0.2979; rs2057482, T = 0.2424; rs3739998, G = 0.2518.). No deviations from Hardy–Weinberg equilibrium were observed in either cases or controls. The genotype and allele frequencies of the rs1867624, rs2057482, and rs3739998 SNPs in MI patients and controls were not significantly different (all p > 0.05).
Table 2

Genotypic and allelic frequencies of three SNPs in MI cases and controls

SNP/groupGenotypea (n (%))χ2 p Allele (n (%))χ2 p OR (95% CI)
rs1867624CCCTTTCT
Case28 (0.07)133 (0.33)240 (0.60)189 (0.24)613 (0.76)2.940.0861.23 (0.97–1.23)
Control18 (0.04)128 (0.31)263 (0.64)0.880.349164 (0.20)654 (0.80)
rs2057482TTCTCCTC
Case17 (0.04)132 (0.33)252 (0.63)166 (0.21)636 (0.79)0.110.751.04 (0.82–1.33)
Control22 (0.05)120 (0.29)267 (0.65)2.940.09164 (0.20)654 (0.80)
rs3739998GGGCCCGC
Case20 (0.05)132 (0.33)249 (0.62)172 (0.21)630 (0.79)0.260.6110.94 (0.74–1.19)
Control24 (0.06)136 (0.33)249 (0.61)0.230.630184 (0.22)634 (0.78)

aAll are in HWE. SNP Single nucleotide polymorphism, MI myocardial infarction

Genotypic and allelic frequencies of three SNPs in MI cases and controls aAll are in HWE. SNP Single nucleotide polymorphism, MI myocardial infarction

Genotypes of the three SNPs and the risk of MI

Results of the genetic model analysis are shown in Table 3. Comparison of both heterozygous and homozygous carriers of the minor allele (C) with homozygous carriers of the major allele (T), suggesting a dominant genetic effect, revealed that the PECAM1 rs1867624 SNPs were not associated with MI. No association of rs2057482 and rs3739998 and MI were observed. Similar, but weaker trends were observed for the recessive model, with no significant associations of the three SNPs with MI (all p > 0.05).
Table 3

Genetic models analyses of the association between three SNPs and MI susceptibility

SNP/groupGenotypeχ2 p OR (95% CI)
rs1867624
DominantTT + CTCC
Case161 (0.40)240 (0.60)1.710.1921.21 (0.91–1.61)
Control146 (0.36)263 (0.64)
RecessiveTTCT + CC
Case28 (0.07)373 (0.93)2.520.1121.63 (0.89–2.98)
Control18 (0.04)391 (0.96)
rs2057482
DominantTT + CTCC
Case149 (0.37)252 (0.63)0.520.471.11 (0.83–1.48)
Control142 (0.35)267 (0.65)
RecessiveTTCT + CC
Case17 (0.04)384 (0.96)0.570.450.78 (0.41–1.49)
Control22 (0.05)387 (0.95)
rs3739998
DominantCC + GCGG
Case152 (0.38)249 (0.62)0.130.7220.95 (0.71–1.26)
Control160 (0.39)249 (0.61)
RecessiveCCGC + GG
Case20 (0.05)381 (0.95)0.310.5800.84 (0.46–1.55)
Control24 (0.06)385 (0.94)

SNP single nucleotide polymorphism, MI myocardial infarction

Genetic models analyses of the association between three SNPs and MI susceptibility SNP single nucleotide polymorphism, MI myocardial infarction

Genotype and lipid levels

We expected that genetic risk associated with the SNPs would be reflected by established CAD risks, including total cholesterol (TC), triglycerides (TGs), high-density lipoprotein cholesterol (HDL-C), low-density lipoprotein cholesterol (LDL-C), creatinine (CRE), or fasting blood glucose (FBG). As shown in Table 4, the rs1867624 variants were associated with high TG concentrations (p = 0.040) and the rs2057482 variants were associated with decreased HDL-C in MI patients compared with the control group (p = 0.003). None of the three SNPs were associated with TC, LDL-C, CRE, or FBG in MI patients (p > 0.05).
Table 4

Lipid levels according to genotype in cases and controls

SNPGenotype (counts)TC mmol/LTG mmol/LHDL-C mmol/LLDL-C mmol/LCRE μmol/LFBG mmol/L
rs1867624
CaseCC (28)4.47 ± 1.181.32 ± 0.951.39 ± 0.622.80 ± 0.9083.03 ± 13.666.38 ± 4.37
CT (133)4.53 ± 1.091.71 ± 1.231.29 ± 0.522.72 ± 0.9084.04 ± 32.327.44 ± 3.58
TT (240)4.59 ± 1.001.65 ± 1.081.25 ± 0.332.79 ± 0.7986.88 ± 30.367.05 ± 3.94
p 0.8760.0400.7440.7370.6590.703
ControlCC (18)5.13 ± 1.071.80 ± 1.871.42 ± 0.433.30 ± 0.7472.83 ± 12.286.95 ± 3.96
CT (128)5.04 ± 0.781.76 ± 1.291.36 ± 0.363.34 ± 0.7471.35 ± 12.205.81 ± 1.91
TT (263)4.89 ± 0.861.61 ± 1.141.38 ± 0.363.25 ± 0.7570.46 ± 13.895.93 ± 1.69
p 0.2620.3530.8430.3960.4710.072
rs2057482
CaseTT (17)4.92 ± 1.071.48 ± 0.751.40 ± 0.223.10 ± 0.9283.88 ± 24.608.22 ± 3.64
CT (132)4.55 ± 0.981.59 ± 0.821.20 ± 0.242.83 ± 0.8488.12 ± 31.467.69 ± 3.60
CC (252)4.54 ± 1.081.69 ± 1.281.32 ± 0.492.71 ± 0.8285.90 ± 28.117.61 ± 3.37
p 0.4930.8110.0030.2030.9440.424
ControlTT (22)4.96 ± 0.601.80 ± 1.731.43 ± 0.333.12 ± 0.6572.00 ± 11.695.98 ± 2.16
CT (120)5.01 ± 0.921.77 ± 1.201.40 ± 0.413.32 ± 0.8471.18 ± 13.945.94 ± 1.87
CC (267)4.92 ± 0.831.61 ± 1.191.36 ± 0.353.28 ± 0.7170.60 ± 13.165.93 ± 1.93
p 0.3270.0640.3960.3750.9100.819
rs3739998
CaseGG (20)4.47 ± 1.221.78 ± 1.641.20 ± 0.342.61 ± 1.0292.34 ± 40.478.49 ± 4.37
GC (132)4.55 ± 1.041.64 ± 1.261.27 ± 0.392.79 ± 0.8583.00 ± 28.887.24 ± 4.06
CC (249)4.58 ± 1.041.64 ± 1.001.29 ± 0.452.76 ± 0.8186.55 ± 29.906.97 ± 3.70
p 0.8660.3710.8550.9270.3640.335
ControlGG (24)4.78 ± 0.671.71 ± 1.381.37 ± 0.283.09 ± 0.6171.54 ± 9.316.06 ± 1.83
GC (136)4.98 ± 0.831.62 ± 1.311.37 ± 0.323.34 ± 0.7270.68 ± 13.465.87 ± 1.84
CC (249)4.94 ± 0.871.68 ± 1.171.37 ± 0.393.26 ± 0.7670.87 ± 13.575.96 ± 1.97
p 0.5940.3270.7240.3520.9490.641

SNP single nucleotide polymorphism, TC total cholesterol, TG triglyceride, HDL-C high-density lipoprotein cholesterol, LDL-C low density lipoprotein cholesterol, CRE creatinine, FBG fasting blood glucose. The value was presented as mean ± SD and significance (p < 0.05) was determined by the Kruskal–Wallis test

Lipid levels according to genotype in cases and controls SNP single nucleotide polymorphism, TC total cholesterol, TG triglyceride, HDL-C high-density lipoprotein cholesterol, LDL-C low density lipoprotein cholesterol, CRE creatinine, FBG fasting blood glucose. The value was presented as mean ± SD and significance (p < 0.05) was determined by the Kruskal–Wallis test

Interactions of the three SNPs and drinking, smoking, age, sex, and hypertension on lipid levels and the risk of MI

The interactions of the three SNPs and drinking, smoking, age, sex, and hypertension on lipid levels and the risk of MI are shown in Table 5. Rs2057482 SNP interacted with age to influence TC levels. The SNP of rs3739998 interacted with sex and hypertension to modulate CRE and TG levels, respectively.
Table 5

The p values for interactions of genotypes and age, drinking and smoking, on lipid levels and the risk of CHD

SNPFactorTCTGHDL-CLDL-CCREFBG
rs1867624Drinking0.1400.3910.7780.0370.5280.642
Smoking0.9570.4700.9360.4850.6840.667
Age0.0100.0410.9300.0750.0200.756
Sex0.0960.0050.4830.6560.0280.005
Hypertension0.5670.0030.2700.2840.7380.311
rs2057482Drinking0.8070.8080.3880.5080.3030.560
Smoking0.9450.2410.3460.4820.9210.394
Age0.0010.2290.6400.1750.3290.621
Sex0.2650.0190.2340.6870.1860.032
Hypertension0.0090.2070.1940.2440.2780.121
rs3739998Drinking0.4840.3310.5590.8800.9000.111
Smoking0.6690.0400.5550.3560.9060.175
Age0.0040.0020.1150.0550.7790.576
Sex0.4920.3440.0140.9043.04E-50.131
Hypertension0.1020.0020.4030.4190.7750.087

SNP single nucleotide polymorphism, TC total cholesterol, TG triglyceride, HDL-C high-density lipoprotein cholesterol, LDL-C low-density lipoprotein cholesterol, FBG fasting blood glucose, CRE creatinine, MI myocardial infarction. A p < 0.003 was considered statistically significant after Bonferroni correction

The p values for interactions of genotypes and age, drinking and smoking, on lipid levels and the risk of CHD SNP single nucleotide polymorphism, TC total cholesterol, TG triglyceride, HDL-C high-density lipoprotein cholesterol, LDL-C low-density lipoprotein cholesterol, FBG fasting blood glucose, CRE creatinine, MI myocardial infarction. A p < 0.003 was considered statistically significant after Bonferroni correction

Systematic meta-analysis of HIF1A with MI or CAD

Recent studies have shown that the SNP rs2057482 in the HIF1A is associated with susceptibility to CAD [1]. However, our studies have shown inconsistent results. Therefore, a systematic meta-analysis was carried out to evaluate the association between HIF1A and MI or CAD in the literature. Following the application of strict screening criteria, 6 articles evaluating a total of 3314 cases and 2687 controls concerning MI or CAD were ultimately included in our quantitative analysis (Fig. 1). The general characteristics of the included studies are listed in Table 6.
Fig. 1

Flow diagram for the process of study selection

Table 6

Characteristics of included studies on HIF1A polymorphisms and MI or CAD risk included in the meta-analysis

CiteFirst authorYearEthnicityCountry/RegionCaseControlGenotype distributionGenotyping methodsDiseasep for HWEa
CaseControl
rs2057482 C > T
CCCTTTCCCTTT
Caucasian
[28]Hlatky2007CaucasianCalifornia9094666412392930913423TaqManAMI0.09
[1]Lopez-Reyes2014CaucasianMexico94967680913465471209TaqManCAD0.41
[29]Duran2015CaucasianSpain4971113391481070383TaqManCAD0.42
Asian
[30]Zheng2009AsianKorea1436185123311711SNaPShotAMI0.42
[15]Guo2017AsianChina58986047693207261259TaqManCAD0.17
rs11549465 C > T
CCCTTTCCCTTT
[28]Hlatky2007CaucasianCalifornia909466747151113589711TaqManAMI0.16
[30]Zheng2009AsianKorea143601310325332SNaPShotAMI0.26
[31]Liu2013AsianChina35621334610020850PCRCAD0.86
[29]Duran2015CaucasianSpain518112402111584262TaqManCAD0.99
[15]Guo2017AsianChina5898603241025544911400TaqManCAD 0.00
rs10873142 T > C
TTTCCCTTTCCC
[28]Hlatky2007CaucasianCalifornia9094665493055524917443TaqManAMI0.12
[30]Zheng2009AsianKorea1436076119914120SNaPShotAMI0.44
[15]Guo2017AsianChina6098603552094544234771TaqManCAD0.80
rs11549467 G > A
GGGAAAGGGAAA
[28]Hlatky2007CaucasianCalifornia90946690090456100TaqManAMI0.81
[31]Liu2013AsianChina35621334016020490PCRCAD0.75
[15]Guo2017AsianChina5898603261724645419387TaqManCAD 0.00
rs41508050 C > T
CCCTTTCCCTTT
[28]Hlatky2007CaucasianCalifornia9094669036045790TaqManAMI0.83
[15]Guo2017AsianChina58986058180843170TaqManCAD0.77

aHWE in control; AMI acute myocardial infarction, CAD coronary artery disease

p values under 0.05 where shown in italic font

Flow diagram for the process of study selection Characteristics of included studies on HIF1A polymorphisms and MI or CAD risk included in the meta-analysis aHWE in control; AMI acute myocardial infarction, CAD coronary artery disease p values under 0.05 where shown in italic font The association between the HIF1A rs2057482 C > T polymorphism and MI or CAD risk was examined in 5 relevant studies involving 2958 patients and 2474 healthy controls. No significant overall associations were identified in allele genetic model (OR = 1.09, 95% CI = 0.96–1.23, p = 0.18, I2 = 76%) (Fig. 2). The sensitivity analysis, which was conducted by omitting studies one by one to examine the stability of the pooled ORs, revealed an obvious change when data from Nan Guo’s study was removed (OR = 1.25, 95% CI = 1.09–1.44, p = 0.002, I2 = 0%) [15] (Additional file 1: Figure S1). Compared with other studies in the meta-analysis, the frequency of the T allele in Korea was greater than 25% and lower than 17% in Caucasians. We perform a separate meta-analysis for Asians and Caucasians since minor allele frequency is quite different among populations. For the Caucasians populations, the HIF1A rs2057482 C > T polymorphism was associated with CAD (OR = 1.27, 95% CI = 1.10–1.47, p = 0.001, I2 = 0%) (Additional file 1: Figure S2). For the Asians populations, the HIF1A rs2057482 C > T polymorphism was associated with CAD (OR = 0.71, 95% CI = 0.56–0.91, p = 0.006, I2 = 0%) (Additional file 1: Figure S3).
Fig. 2

OR and 95% CIs of the associations between HIF1A rs2057482 CT polymorphism and MI or CAD in allele model. The squares and horizontal lines correspond to the study-specific OR and 95% CI. The area of the squares indicates the study-specific weight (inverse of the variance). The diamond represents the pooled OR and 95% CI

OR and 95% CIs of the associations between HIF1A rs2057482 CT polymorphism and MI or CAD in allele model. The squares and horizontal lines correspond to the study-specific OR and 95% CI. The area of the squares indicates the study-specific weight (inverse of the variance). The diamond represents the pooled OR and 95% CI The association between HIF1A rs11549465 C > T polymorphism and CAD risk was examined in 5 studies involving 2011 cases and 2386 controls. A protective effect on CAD development was observed in the variant T allele (OR = 0.84, 95% CI = 0.75–0.95, p = 0.006, I2 = 0%) (Fig. 3).
Fig. 3

OR and 95% CIs of the associations between HIF1A rs11549465 CT polymorphism and MI or CAD in allele model. The squares and horizontal lines correspond to the study-specific OR and 95% CI. The area of the squares indicates the study-specific weight (inverse of the variance). The diamond represents the pooled OR and 95% CI

OR and 95% CIs of the associations between HIF1A rs11549465 CT polymorphism and MI or CAD in allele model. The squares and horizontal lines correspond to the study-specific OR and 95% CI. The area of the squares indicates the study-specific weight (inverse of the variance). The diamond represents the pooled OR and 95% CI For the rs10873142 T > C polymorphism, the allele model was associated with increased overall risk of CAD (OR = 1.28, 95% CI = 1.14–1.45, p < 0.0001, I2 = 0%) (Additional file 1: Figure S4). The rs11549467 and rs41508050 polymorphism was not associated with CAD (OR = 1.16, 95% CI = 0.91–1.47, p = 0.22, I2 = 10%; OR = 1.94, 95% CI = 0.99–3.81, p = 0.05, I2 = 6%) (Additional file 1: Figures S5 and S6).

Discussion

In the present study, we aimed to investigate whether genetic variations in genes that encode proteins expressed in smooth muscle cells (PECAM1, HIF1A) and endothelial cells (KIAA1462) influence MI risk in Han Chinese. Through a series of genetic testings of the three SNPs, we find that the rs1867624 and rs2057482 SNPs were significantly associated with lipid levels in in MI patients compared with the control group (p < 0.05). However, our results disclosed no association between the SNPs and susceptibility to MI (p > 0.05 for all). The allelic frequency of selected SNPs (rs1867624, C = 0.24 and 0.20; rs2057482, T = 0.21 and 0.20; rs3739998, G = 0.21 and 0.22 for cases and controls, respectively) all displayed in accordance with the one derived from the Asian populations, according to HaploReg v4.1 (rs1867624, C = 0.23; rs2057482, T = 0.20; rs3739998, G = 0.20.). The rationale for the selection of the three smooth muscle cells and endothelial cells-related genes investigated in this study is as follows. PECAM1 gene is found on the surface of platelets, monocytes, neutrophils, and may play a role in the inhibition of the formation of adherent junctions in endothelial cells [20]. PECAM-1 has been implicated in the maintenance of vascular barrier integrity; failure to restore barrier function contributes to the development of chronic inflammatory diseases such as atherosclerosis [21]. HIF1A, a natural antisense transcript of HIF1alpha, is overexpressed in the failing heart [22]. By modulating the stability of HIF1alpha messenger RNA, HIF1A has the capacity to regulate angiogenesis, an important component of the response of the heart to ischemia [23]. KIAA1462 is a protein-coding gene which is localized in the nucleus, cytosol, and plasma membrane. KIAA1462 was associated with coronary artery disease in European and South Asian population [18, 24, 25]. Akashi et al. identified the KIAA1462 as a novel protein localized at cell–cell junctions and concluded that the accumulation of KIAA1462 into endothelial cell–cell junctions depends on VE-cadherin-mediated cell–cell adhesion [17]. Our study showed that rs1867624 was associated with triglyceride (TG) levels but not with MI in Chinese population. In a previous study, Norata et al. showed that PECAM1 implicated in EC activation have been identified as modulated by triglyceride-rich lipoproteins, confirming their role in determining endothelial dysfunction [26]. In the current research, we were unable to observe a significant association of PECAM1 rs1867624 SNPs with MI in Han Chinese, However, there was considerable evidence that rs1867624 is associated with the risk of CAD in the European, South Asian, and African American [5]. Howson, et al. showed that the C-allele of PECAM1 is associated with reduced CAD risk, increased expression of PECAM1 in peripheral blood mononuclear cells, which is inconsistent with our findings. The differences in these studies may be explained by ethnic differences, environment, or lifestyle that also affected the development of MI. Another explanation is that the participants in the present study were first onset of MI, so that risk factor profile may differ with recurrent CAD patients. The mechanisms of how these loci contribute to susceptibility to MI are still not well understood. Further study is required to elucidate how these loci contribute to conferring susceptibility to MI and risk factors of MI. Our study showed that rs2057482 was associated with HDL-cholesterol levels but we did not observe any association between HIF1A rs2057482 and the risk of MI, which is consistent with the studies by Alberto López-Reyes et al. [1]. To avoid false-negative results, we performed a meta-analysis by pooling 5 studies with totals of 2958 cases and 2474 controls to confirm the results. The rs2057482 variant allele exhibited no significant association with MI or CAD risks. The sensitivity analysis of rs2057482 found that the result of pooling ORs was significantly changed once Nan Guo’s study was excluded. These discrepancies may be attributable to the different genetic backgrounds of the study populations. To account for this difference, we performed the meta-analysis with each part considered separately. For the Caucasians populations, the HIF1A rs2057482 C > T polymorphism was associated with increased risk of CAD. For the Asians populations, the HIF1A rs2057482 C > T polymorphism was associated with decreased risk of CAD. Interestingly, the heterogeneity was consistent with the result of separate meta-analysis in Caucasians. The differences in these studies may be explained by Nan Guo’s study which has significant heterogeneity between the studies. Several limitations should be acknowledged in the present study. First, the sample size was relatively small and the participants were limited to Chinese ethnicity. Second, there were differences in some clinical characteristics between the patients and controls. Although several confounders have been adjusted for the statistical analyses, we could not completely eliminate the potential influences of these factors on the results. Thirdly, age of control group may be a limitation of the study. Because cases are age-matched to controls, we cannot rule out the possibility that a proportion of controls would develop MI or CAD in the near future. Finally, the biological mechanism of genetic variants about the three genes was not conducted in this study. Larger studies should be followed up to assess the potential association of the SNPs with more complex, clinical-disease-related endpoints.

Conclusions

The results of the present study showed that the subjects with rs1867624 CC genotype in MI cases had lower TG levels than the subjects with rs1867624 CT and rs1867624 TT genotypes. The subjects with rs2057482 CT genotype in MI patients had lower HDL-C levels than the subjects with rs2057482 CC and rs2057482 TT genotypes. Several SNPs interacted with age and sex to modify TC and CRE levels, and the risk of MI. In the meta-analysis of HIF1A, the rs11549465 C > T and rs10873142 T > C polymorphisms, but not rs2057482, rs11549467 and rs41508050 were correlated with overall MI or CAD risk. In conclusion, our research suggested a lack of contribution of the three SNPs to MI in a Chinese Han population. However, this study was designed as a pilot study and further investigations are needed to confirm our results and to elucidate unresolved questions.

Methods

Sample collection

A total of 401 hospitalized MI patients were enrolled at the Second Affiliated Hospital, Harbin Medical University (China) between September 2016 and November 2017. The study protocol was approved by Ethics Committee of the Second Affiliated Hospital of Harbin Medical University and all experimental procedures (DNA extraction and genotyping) complied with the 1975 Declaration of Helsinki. All participates gave written informed consent to take part in the present study. The diagnosis of MI was based on the Pakistan Risk of Myocardial Infarction Study (PROMIS) international guideline. Following screening by medically qualified research officers, patients aged 30–80 years have been eligible for inclusion as cases if they fulfill all of the following criteria: (1) sustained clinical symptoms suggestive of MI lasting longer than 20 min within the previous 24 h; (2) ECG changes of MI (i.e., new pathologic Q waves, at least 1 mm ST elevation in any two or more contiguous limb leads or a new left bundle branch block, or new persistent ST–T wave changes diagnostic of a non-Q wave MI); (3) confirmatory troponin-T measurements; and (4) no previous cardiovascular diseases, defined as self-reported history of angina, MI, coronary revascularization, transient ischemic attack, stroke, or evidence of CHD on prior ECG or in other medical records [5, 27]. A group of 409 age- (5-year bands) and sex-matched medical center patients without a history of CAD or symptoms of MI were selected as controls. Patients with cerebrovascular, neurological, or kidney disease; blood disorders; cancer; peripheral vascular disease; or autoimmune diseases were excluded from the control group. The controls were free of MI by questionnaires, history-taking, and clinical examination. The examination comprised physical examination, blood sampling, electrocardiography, chest X-ray, and Doppler echocardiography. Participant age, sex, blood pressure, lipid profile, fasting glucose, medical, drug, smoking, and alcohol histories were collected.

SNP selection

After reviewing the literature for CAD candidate genes, there are many SNPs in the genes. To determine the investigation of loci, a tagSNP approach was used. We selected three SNPs on the basis of the following assumptions: (1) selected SNPs were established by Haploview (Broad Institute of MIT and Harvard, Cambridge, MA, USA, version 4.2) with the criteria (MAF > 0.05 and 푟2 > 0.8) from the known SNP data in the Chinese Han population (CHB + CHS); (2) SNPs information was obtained from the database, 1000 Genomes Project (http://browser.1000genomes.org); (3) SNPs were not reported in Chinese Hans; and (4) SNPs might be associated with the smooth muscle cells and endothelial cells in recent studies.

SNP genotyping

The genomic DNA was extracted using a GeneJET Whole Blood Genomic DNA Purification Mini Kit (Thermo Scientific, USA) as per the product instruction. The SNP genotyping work was performed using an improved multiplex ligation detection reaction (iMLDR) technique developed by Genesky Biotechnologies Inc. (Shanghai, China). A multiplex PCR-ligase detection reaction method was used in the iMLDR. For each SNP, the alleles were distinguished by different fluorescent labels of allele-specific oligonucleotide probe pairs. Different SNPs were further distinguished by different extended lengths at the 3′end. Two negative controls were set: one with double-distilled water as template and the other with DNA sample without primers while keeping all other conditions the same in one plate. Duplicate tests were designed and the results were consistent. Genotyping call rate is 100%. A random sample accounting for ~ 5% (n = 40) of the total DNA samples was directly sequenced using Big Dye-terminator version 3.1 and an ABI3730XL automated sequencer (Applied Biosystems) to confirm the results of iMLDR.

Selection of relevant studies

Study reports published before June 25, 2018 were retrieved from PubMed using the search terms (coronary artery disease, coronary heart disease, or myocardial infarction), (“HIF1A” or “MOP1”), and (polymorphism, variant, or mutation). Case-control studies of the relationship between HIF1A polymorphism and CAD or MI were eligible. At least two studies of HIF1A polymorphism reporting the genotype frequencies of each included HIF1A SNP (i.e., rs2057482, rs11549465, rs10873142, rs11549467, or rs41508050) were desired. Only studies published in English were eligible. Studies were excluded if they were not investigations of HIF1A SNPs (rs2057482, rs11549465, rs10873142, rs11549467, or rs41508050), were duplicate publications of the same population, or did not include a control group. Six articles including 3314 cases and 2687controls were selected (Fig. 1).

Statistical analyses

All statistical analyses were performed using SPSS 13.0 (SPSS Inc., Chicago, IL, USA) and Microsoft Excel 2016 (Microsoft Corp., Redmond, WA, USA). All tests were two-sided and p values < 0.05 were considered significant. Between-group differences in demographic characteristics and genotype frequencies of the three SNPs were evaluated by Student’s t test for continuous variables and χ2 tests for categorical variables. The Hardy–Weinberg equilibrium was assessed for controls using the goodness-of-fit χ2 test (with 1 degree of freedom). A chi-square analysis was used to evaluate the difference in genotype distribution between 409 controls and 401 MI patients. Associations of genotypes and alleles and the risk of MI were estimated by odds ratios (ORs) and 95% confidence intervals (CIs). Differences of lipid levels and genotypes were determined by the Kruskal–Wallis test. Significant interactions of the three SNPs with alcohol consumption, cigarette smoking, age, sex, and hypertension with lipid levels and the risk of MI were detected by the independent-samples t test for categorical variables and linear regression analysis for continuous variables after controlling for potential confounders; a p value < 0.003 after the Bonferroni correction was considered statistically significant. Revman 5.3 software (Nordic Cochrane Centre, Cochrane Collaboration, Copenhagen, Denmark) was used to for the meta-analysis. ORs and their 95% CIs were calculated to determine the significance of associations between HIF1A allele genotypes and susceptibility to MI or CAD. Heterogeneity was tested with the χ2-based Q and I2 tests. The pooled OR was calculated using a fixed effect model in the absence of heterogeneity (p > 0.05, I2 < 50%). Otherwise, a random effect model was used. The stability of the pooled ORs was determined by one-way sensitivity analysis. Figure S1. The sensitivity analysis of HIF1A rs2057482. Figure S2. The meta-analysis of HIF1A rs2057482 in Caucasians. Figure S3. The meta-analysis of HIF1A rs2057482 in Asian. Figure S4. The meta analysis of HIF1A rs10873142. Figure S5. The meta analysis of HIF1A rs11549467. Figure S6. The meta analysis of HIF1A rs41508050. (PPTX 1606 kb)
  31 in total

1.  A coronary artery disease-associated gene product, JCAD/KIAA1462, is a novel component of endothelial cell-cell junctions.

Authors:  Masaya Akashi; Tomohito Higashi; Sayuri Masuda; Takahide Komori; Mikio Furuse
Journal:  Biochem Biophys Res Commun       Date:  2011-08-22       Impact factor: 3.575

2.  The HIF1A rs2057482 polymorphism is associated with risk of developing premature coronary artery disease and with some metabolic and cardiovascular risk factors. The Genetics of Atherosclerotic Disease (GEA) Mexican Study.

Authors:  Alberto López-Reyes; José Manuel Rodríguez-Pérez; Javier Fernández-Torres; Nancy Martínez-Rodríguez; Nonanzit Pérez-Hernández; Arturo Javier Fuentes-Gómez; Carlos Alberto Aguilar-González; Edith Alvarez-León; Carlos Posadas-Romero; Teresa Villarreal-Molina; Carlos Pineda; Gilberto Vargas-Alarcón
Journal:  Exp Mol Pathol       Date:  2014-04-24       Impact factor: 3.362

3.  Correlation between genetic polymorphisms within the MAPK1/HIF-1/HO-1 signaling pathway and risk or prognosis of perimenopausal coronary artery disease.

Authors:  Nan Guo; Nan Zhang; Liqiu Yan; Xufen Cao; Jiawang Wang; Yunfei Wang
Journal:  Clin Cardiol       Date:  2017-04-26       Impact factor: 2.882

4.  Genome-wide association study identifies a new locus for coronary artery disease on chromosome 10p11.23.

Authors:  Jeanette Erdmann; Christina Willenborg; Janja Nahrstaedt; Michael Preuss; Inke R König; Jens Baumert; Patrick Linsel-Nitschke; Christian Gieger; Stephanie Tennstedt; Petra Belcredi; Zouhair Aherrahrou; Norman Klopp; Christina Loley; Klaus Stark; Christian Hengstenberg; Petra Bruse; Jennifer Freyer; Arnika K Wagner; Anja Medack; Wolfgang Lieb; Anika Grosshennig; Hendrik B Sager; Adrian Reinhardt; Arne Schäfer; Stefan Schreiber; Nour Eddine El Mokhtari; Dorette Raaz-Schrauder; Thomas Illig; Christoph D Garlichs; Arif B Ekici; André Reis; Jürgen Schrezenmeir; Diana Rubin; Andreas Ziegler; H-E Wichmann; Angela Doering; Christa Meisinger; Thomas Meitinger; Annette Peters; Heribert Schunkert
Journal:  Eur Heart J       Date:  2010-11-18       Impact factor: 29.983

Review 5.  Genetic risk factors in myocardial infarction at young age.

Authors:  E Incalcaterra; E Hoffmann; M R Averna; G Caimi
Journal:  Minerva Cardioangiol       Date:  2004-08       Impact factor: 1.347

6.  [Genes for Fibrogenesis in the Determination of Susceptibility to Myocardial Infarction].

Authors:  I A Goncharova; O A Makeeva; M V Golubenko; A V Markov; N V Tarasenko; A A Sleptsov; V P Puzyrev
Journal:  Mol Biol (Mosk)       Date:  2016 Jan-Feb

7.  Fifteen new risk loci for coronary artery disease highlight arterial-wall-specific mechanisms.

Authors:  Joanna M M Howson; Wei Zhao; Daniel R Barnes; Weang-Kee Ho; Robin Young; Dirk S Paul; Lindsay L Waite; Daniel F Freitag; Eric B Fauman; Elias L Salfati; Benjamin B Sun; John D Eicher; Andrew D Johnson; Wayne H H Sheu; Sune F Nielsen; Wei-Yu Lin; Praveen Surendran; Anders Malarstig; Jemma B Wilk; Anne Tybjærg-Hansen; Katrine L Rasmussen; Pia R Kamstrup; Panos Deloukas; Jeanette Erdmann; Sekar Kathiresan; Nilesh J Samani; Heribert Schunkert; Hugh Watkins; Ron Do; Daniel J Rader; Julie A Johnson; Stanley L Hazen; Arshed A Quyyumi; John A Spertus; Carl J Pepine; Nora Franceschini; Anne Justice; Alex P Reiner; Steven Buyske; Lucia A Hindorff; Cara L Carty; Kari E North; Charles Kooperberg; Eric Boerwinkle; Kristin Young; Mariaelisa Graff; Ulrike Peters; Devin Absher; Chao A Hsiung; Wen-Jane Lee; Kent D Taylor; Ying-Hsiang Chen; I-Te Lee; Xiuqing Guo; Ren-Hua Chung; Yi-Jen Hung; Jerome I Rotter; Jyh-Ming J Juang; Thomas Quertermous; Tzung-Dau Wang; Asif Rasheed; Philippe Frossard; Dewan S Alam; Abdulla Al Shafi Majumder; Emanuele Di Angelantonio; Rajiv Chowdhury; Yii-Der Ida Chen; Børge G Nordestgaard; Themistocles L Assimes; John Danesh; Adam S Butterworth; Danish Saleheen
Journal:  Nat Genet       Date:  2017-05-22       Impact factor: 41.307

8.  The Pakistan Risk of Myocardial Infarction Study: a resource for the study of genetic, lifestyle and other determinants of myocardial infarction in South Asia.

Authors:  Danish Saleheen; Moazzam Zaidi; Asif Rasheed; Usman Ahmad; Abdul Hakeem; Muhammed Murtaza; Waleed Kayani; Azhar Faruqui; Assadullah Kundi; Khan Shah Zaman; Zia Yaqoob; Liaquat Ali Cheema; Abdus Samad; Syed Zahed Rasheed; Nadeem Hayat Mallick; Muhammad Azhar; Rashid Jooma; Ali Raza Gardezi; Nazir Memon; Abdul Ghaffar; Nadir Khan; Nabi Shah; Asad Ali Shah; Maria Samuel; Farina Hanif; Madiha Yameen; Sobia Naz; Aisha Sultana; Aisha Nazir; Shehzad Raza; Muhammad Shazad; Sana Nasim; Muhammad Ahsan Javed; Syed Saadat Ali; Mehmood Jafree; Muhammad Imran Nisar; Muhammad Salman Daood; Altaf Hussain; Nadeem Sarwar; Ayeesha Kamal; Panos Deloukas; Muhammad Ishaq; Philippe Frossard; John Danesh
Journal:  Eur J Epidemiol       Date:  2009-04-30       Impact factor: 8.082

9.  Coronary-Heart-Disease-Associated Genetic Variant at the COL4A1/COL4A2 Locus Affects COL4A1/COL4A2 Expression, Vascular Cell Survival, Atherosclerotic Plaque Stability and Risk of Myocardial Infarction.

Authors:  Wei Yang; Fu Liang Ng; Kenneth Chan; Xiangyuan Pu; Robin N Poston; Meixia Ren; Weiwei An; Ruoxin Zhang; Jingchun Wu; Shunying Yan; Haiteng Situ; Xinjie He; Yequn Chen; Xuerui Tan; Qingzhong Xiao; Arthur T Tucker; Mark J Caulfield; Shu Ye
Journal:  PLoS Genet       Date:  2016-07-07       Impact factor: 5.917

10.  Large scale association analysis of novel genetic loci for coronary artery disease.

Authors:  N J Samani; P Deloukas; J Erdmann; C Hengstenberg; K Kuulasmaa; R McGinnis; H Schunkert; N Soranzo; J Thompson; L Tiret; A Ziegler
Journal:  Arterioscler Thromb Vasc Biol       Date:  2009-01-22       Impact factor: 8.311

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