Literature DB >> 30677938

The latitudinal gradient in rock-inhabiting bacterial community compositions in Victoria Land, Antarctica.

Jaejin Lee1, Junho Cho2, Yong-Joon Cho3, Ahnna Cho3, Jusun Woo4, Jongik Lee4, Soon Gyu Hong3, Woo Jun Sul5, Ok-Sun Kim6.   

Abstract

The harsh conditions in Victoria Land, Antarctica have formed a simple ecosystem dominated by microbes that use rocks as shelters to avoid environmental stressors. The area is composed of basement rocks that illustrate the history of complex deformation, thus it is highly valuable not only in perspectives of geology but also in biological aspects. Because this region is inhospitable to higher-level organisms and receives least external influences, it can be an ideal environment to investigate the relationship between rock-inhabiting bacterial communities and environmental factors. In such conditions, inorganics dissolved from minerals can be considered as key factors influencing rock-inhabiting bacterial communities. Thus, the present study attempted to explore rock-inhabiting bacterial communities throughout Victoria Land, to identify environmental parameters that are more influential on bacterial community compositions, and to investigate latitudinal gradients in environmental parameters and rock-inhabiting bacterial communities. The results suggested that (i) rock-inhabiting bacterial communities in Victoria Land predominately consisted of either Actinobacteria or Proteobacteria; (ii) latitudinal gradients in rock-inhabiting bacterial community compositions and some environmental parameters were observed; (iii) latitude, pH, nitrate, and sulfate significantly correlated with the dominant phyla; and (iv) the Classification and Regression Tree (CART) analysis demonstrated that latitude, pH, and sulfate concentrations could explain the dominant phylum with 89% accuracy. These findings can provide important insight into the link between environmental factors and rock-inhabiting bacterial community compositions in conditions with extremely cold temperatures and high levels of radiation, which could also be of interest in astrobiology.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Antarctica; Correlation; Latitudinal gradient; Machine learning; Rock-inhabiting bacterial community

Mesh:

Substances:

Year:  2018        PMID: 30677938     DOI: 10.1016/j.scitotenv.2018.12.073

Source DB:  PubMed          Journal:  Sci Total Environ        ISSN: 0048-9697            Impact factor:   7.963


  5 in total

1.  Metagenomes in the Borderline Ecosystems of the Antarctic Cryptoendolithic Communities.

Authors:  Claudia Coleine; Davide Albanese; Silvano Onofri; Susannah G Tringe; Christa Pennacchio; Claudio Donati; Jason E Stajich; Laura Selbmann
Journal:  Microbiol Resour Announc       Date:  2020-03-05

2.  Distinct Microbial Communities in Adjacent Rock and Soil Substrates on a High Arctic Polar Desert.

Authors:  Yong-Hoe Choe; Mincheol Kim; Yoo Kyung Lee
Journal:  Front Microbiol       Date:  2021-01-08       Impact factor: 5.640

3.  Rare bacterial biosphere is more environmental controlled and deterministically governed than abundant one in sediment of thermokarst lakes across the Qinghai-Tibet Plateau.

Authors:  Ze Ren; Wei Luo; Cheng Zhang
Journal:  Front Microbiol       Date:  2022-07-25       Impact factor: 6.064

4.  Specific adaptations are selected in opposite sun exposed Antarctic cryptoendolithic communities as revealed by untargeted metabolomics.

Authors:  Claudia Coleine; Federica Gevi; Giuseppina Fanelli; Silvano Onofri; Anna Maria Timperio; Laura Selbmann
Journal:  PLoS One       Date:  2020-05-27       Impact factor: 3.240

5.  Endolithic Bacterial Diversity in Lichen-Dominated Communities Is Shaped by Sun Exposure in McMurdo Dry Valleys, Antarctica.

Authors:  Ambra Mezzasoma; Claudia Coleine; Ciro Sannino; Laura Selbmann
Journal:  Microb Ecol       Date:  2021-06-03       Impact factor: 4.552

  5 in total

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