Literature DB >> 30677296

Library-Based LAMMPS Implementation of High-Dimensional Neural Network Potentials.

Andreas Singraber1, Jörg Behler2, Christoph Dellago1.   

Abstract

Neural networks and other machine learning approaches have been successfully used to accurately represent atomic interaction potentials derived from computationally demanding electronic structure calculations. Due to their low computational cost, such representations open the possibility for large scale reactive molecular dynamics simulations of processes with bonding situations that cannot be described accurately with traditional empirical force fields. Here, we present a library of functions developed for the implementation of neural network potentials. Written in C++, this library incorporates several strategies resulting in a very high efficiency of neural network potential-energy and force evaluations. Based on this library, we have developed an implementation of the neural network potential within the molecular dynamics package LAMMPS and demonstrate its performance using liquid water as a test system.

Entities:  

Year:  2019        PMID: 30677296     DOI: 10.1021/acs.jctc.8b00770

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  11 in total

1.  Ab initio thermodynamics of liquid and solid water.

Authors:  Bingqing Cheng; Edgar A Engel; Jörg Behler; Christoph Dellago; Michele Ceriotti
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-04       Impact factor: 11.205

Review 2.  Molecular Modeling in Anion Exchange Membrane Research: A Brief Review of Recent Applications.

Authors:  Mirat Karibayev; Sandugash Kalybekkyzy; Yanwei Wang; Almagul Mentbayeva
Journal:  Molecules       Date:  2022-06-02       Impact factor: 4.927

3.  Machine learning molecular dynamics simulations toward exploration of high-temperature properties of nuclear fuel materials: case study of thorium dioxide.

Authors:  Masahiko Okumura; Hiroki Nakamura; Mitsuhiro Itakura; Masahiko Machida; Michael W D Cooper; Keita Kobayashi
Journal:  Sci Rep       Date:  2022-06-13       Impact factor: 4.996

Review 4.  Data-Driven Materials Science: Status, Challenges, and Perspectives.

Authors:  Lauri Himanen; Amber Geurts; Adam Stuart Foster; Patrick Rinke
Journal:  Adv Sci (Weinh)       Date:  2019-09-01       Impact factor: 16.806

5.  E-Commerce Credit Risk Assessment Based on Fuzzy Neural Network.

Authors:  Lina Wang; Hui Song
Journal:  Comput Intell Neurosci       Date:  2022-01-07

6.  Local Kernel Regression and Neural Network Approaches to the Conformational Landscapes of Oligopeptides.

Authors:  Raimon Fabregat; Alberto Fabrizio; Edgar A Engel; Benjamin Meyer; Veronika Juraskova; Michele Ceriotti; Clemence Corminboeuf
Journal:  J Chem Theory Comput       Date:  2022-02-18       Impact factor: 6.006

7.  A complete description of thermodynamic stabilities of molecular crystals.

Authors:  Venkat Kapil; Edgar A Engel
Journal:  Proc Natl Acad Sci U S A       Date:  2022-02-08       Impact factor: 11.205

8.  Iterative training set refinement enables reactive molecular dynamics via machine learned forces.

Authors:  Lei Chen; Ivan Sukuba; Michael Probst; Alexander Kaiser
Journal:  RSC Adv       Date:  2020-01-27       Impact factor: 4.036

9.  Thermodynamics of high-pressure ice phases explored with atomistic simulations.

Authors:  Aleks Reinhardt; Mandy Bethkenhagen; Federica Coppari; Marius Millot; Sebastien Hamel; Bingqing Cheng
Journal:  Nat Commun       Date:  2022-08-10       Impact factor: 17.694

10.  The Role of Machine Learning in the Understanding and Design of Materials.

Authors:  Seyed Mohamad Moosavi; Kevin Maik Jablonka; Berend Smit
Journal:  J Am Chem Soc       Date:  2020-11-10       Impact factor: 15.419

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