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Literature DB >> 30674478

Towards a Genome-Based Reclassification of the Genus Lactobacillus.

Stijn Wittouck¹, Sander Wuyts¹, Sarah Lebeer².

Abstract

Mesh：

Year: 2019 PMID： 30674478 PMCID： PMC6344627 DOI： 10.1128/AEM.02155-18

Source DB: PubMed Journal: Appl Environ Microbiol ISSN： 0099-2240 Impact factor: 4.792

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7 in total

1. A Genomic View of Lactobacilli and Pediococci Demonstrates that Phylogeny Matches Ecology and Physiology.

Authors: Jinshui Zheng; Lifang Ruan; Ming Sun; Michael Gänzle
Journal: Appl Environ Microbiol Date: 2015-08-07 Impact factor: 4.792

2. Comparative Genomics of the Genus Lactobacillus Reveals Robust Phylogroups That Provide the Basis for Reclassification.

Authors: Elisa Salvetti; Hugh M B Harris; Giovanna E Felis; Paul W O'Toole
Journal: Appl Environ Microbiol Date: 2018-08-17 Impact factor: 4.792

3. A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life.

Authors: Donovan H Parks; Maria Chuvochina; David W Waite; Christian Rinke; Adam Skarshewski; Pierre-Alain Chaumeil; Philip Hugenholtz
Journal: Nat Biotechnol Date: 2018-08-27 Impact factor: 54.908

4. A proposed genus boundary for the prokaryotes based on genomic insights.

Authors: Qi-Long Qin; Bin-Bin Xie; Xi-Ying Zhang; Xiu-Lan Chen; Bai-Cheng Zhou; Jizhong Zhou; Aharon Oren; Yu-Zhong Zhang
Journal: J Bacteriol Date: 2014-04-04 Impact factor: 3.490

5. The Genus Lactobacillus: A Taxonomic Update.

Authors: Elisa Salvetti; Sandra Torriani; Giovanna E Felis
Journal: Probiotics Antimicrob Proteins Date: 2012-12 Impact factor: 4.609

6. Large-Scale Phylogenomics of the Lactobacillus casei Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features.

Authors: Sander Wuyts; Stijn Wittouck; Ilke De Boeck; Camille N Allonsius; Edoardo Pasolli; Nicola Segata; Sarah Lebeer
Journal: mSystems Date: 2017-08-22 Impact factor: 6.496

7. Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera.

Authors: Zhihong Sun; Hugh M B Harris; Angela McCann; Chenyi Guo; Silvia Argimón; Wenyi Zhang; Xianwei Yang; Ian B Jeffery; Jakki C Cooney; Todd F Kagawa; Wenjun Liu; Yuqin Song; Elisa Salvetti; Agnieszka Wrobel; Pia Rasinkangas; Julian Parkhill; Mary C Rea; Orla O'Sullivan; Jarmo Ritari; François P Douillard; R Paul Ross; Ruifu Yang; Alexandra E Briner; Giovanna E Felis; Willem M de Vos; Rodolphe Barrangou; Todd R Klaenhammer; Page W Caufield; Yujun Cui; Heping Zhang; Paul W O'Toole
Journal: Nat Commun Date: 2015-09-29 Impact factor: 14.919

7 in total

6 in total

1. Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?

Authors: Robert Lücking; M Catherine Aime; Barbara Robbertse; Andrew N Miller; Hiran A Ariyawansa; Takayuki Aoki; Gianluigi Cardinali; Pedro W Crous; Irina S Druzhinina; David M Geiser; David L Hawksworth; Kevin D Hyde; Laszlo Irinyi; Rajesh Jeewon; Peter R Johnston; Paul M Kirk; Elaine Malosso; Tom W May; Wieland Meyer; Maarja Öpik; Vincent Robert; Marc Stadler; Marco Thines; Duong Vu; Andrey M Yurkov; Ning Zhang; Conrad L Schoch
Journal: IMA Fungus Date: 2020-07-10 Impact factor: 3.515

Towards a Genome-Based Reclassification of the Genus Lactobacillus.

1. A Genomic View of Lactobacilli and Pediococci Demonstrates that Phylogeny Matches Ecology and Physiology.

2. Comparative Genomics of the Genus Lactobacillus Reveals Robust Phylogroups That Provide the Basis for Reclassification.

3. A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life.

4. A proposed genus boundary for the prokaryotes based on genomic insights.

5. The Genus Lactobacillus: A Taxonomic Update.

6. Large-Scale Phylogenomics of the Lactobacillus casei Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features.

7. Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera.

1. Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?

2. Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?

Review 3. The food-gut axis: lactic acid bacteria and their link to food, the gut microbiome and human health.

4. A Genome-Based Species Taxonomy of the Lactobacillus Genus Complex.

5. A Genus Definition for Bacteria and Archaea Based on a Standard Genome Relatedness Index.

Review 6. Health-Promoting Properties of Lactobacilli in Fermented Dairy Products.