Literature DB >> 30674262

Recent Progress in Machine Learning-based Prediction of Peptide Activity for Drug Discovery.

Qihui Wu1, Hanzhong Ke2, Dongli Li1, Qi Wang1,3, Jiansong Fang1,3, Jingwei Zhou1.   

Abstract

Over the past decades, peptide as a therapeutic candidate has received increasing attention in drug discovery, especially for antimicrobial peptides (AMPs), anticancer peptides (ACPs) and antiinflammatory peptides (AIPs). It is considered that the peptides can regulate various complex diseases which are previously untouchable. In recent years, the critical problem of antimicrobial resistance drives the pharmaceutical industry to look for new therapeutic agents. Compared to organic small drugs, peptide- based therapy exhibits high specificity and minimal toxicity. Thus, peptides are widely recruited in the design and discovery of new potent drugs. Currently, large-scale screening of peptide activity with traditional approaches is costly, time-consuming and labor-intensive. Hence, in silico methods, mainly machine learning approaches, for their accuracy and effectiveness, have been introduced to predict the peptide activity. In this review, we document the recent progress in machine learning-based prediction of peptides which will be of great benefit to the discovery of potential active AMPs, ACPs and AIPs. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.

Entities:  

Keywords:  Activity prediction; Anti-inflammatory peptides (AIPs); Anticancer peptides (ACPs); Antimicrobial peptides (AMPs); Machine learning; R&D.

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Year:  2019        PMID: 30674262     DOI: 10.2174/1568026619666190122151634

Source DB:  PubMed          Journal:  Curr Top Med Chem        ISSN: 1568-0266            Impact factor:   3.295


  3 in total

1.  PTML modeling for peptide discovery: in silico design of non-hemolytic peptides with antihypertensive activity.

Authors:  Valeria V Kleandrova; Julio A Rojas-Vargas; Marcus T Scotti; Alejandro Speck-Planche
Journal:  Mol Divers       Date:  2021-11-21       Impact factor: 3.364

2.  Ensemble-AMPPred: Robust AMP Prediction and Recognition Using the Ensemble Learning Method with a New Hybrid Feature for Differentiating AMPs.

Authors:  Supatcha Lertampaiporn; Tayvich Vorapreeda; Apiradee Hongsthong; Chinae Thammarongtham
Journal:  Genes (Basel)       Date:  2021-01-21       Impact factor: 4.096

3.  AMPlify: attentive deep learning model for discovery of novel antimicrobial peptides effective against WHO priority pathogens.

Authors:  Chenkai Li; Darcy Sutherland; S Austin Hammond; Chen Yang; Figali Taho; Lauren Bergman; Simon Houston; René L Warren; Titus Wong; Linda M N Hoang; Caroline E Cameron; Caren C Helbing; Inanc Birol
Journal:  BMC Genomics       Date:  2022-01-25       Impact factor: 3.969

  3 in total

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