Literature DB >> 30670541

Modelling Sex-Specific Crossover Patterning in Arabidopsis.

Andrew Lloyd1,2, Eric Jenczewski2.   

Abstract

"Interference" is a major force governing the patterning of meiotic crossovers. A leading model describing how interference influences crossover patterning is the beam-film model, a mechanical model based on the accumulation and redistribution of crossover-promoting "stress" along the chromosome axis. We use the beam-film model in conjunction with a large Arabidopsis reciprocal backcross data set to gain "mechanistic" insights into the differences between male and female meiosis, and crossover patterning. Beam-film modeling suggests that the underlying mechanics of crossover patterning and interference are identical in the two sexes, with the large difference in recombination rates and distributions able to be entirely explained by the shorter chromosome axes in females. The modeling supports previous indications that fewer crossovers occur via the class II pathway in female meiosis and that this could be explained by reduced DNA double-strand breaks in female meiosis, paralleling the observed reduction in synaptonemal complex length between the two sexes. We also demonstrate that changes in the strength of suppression of neighboring class I crossovers can have opposite effects on "effective" interference depending on the distance between two genetic intervals.
Copyright © 2019 by the Genetics Society of America.

Entities:  

Keywords:  beam-film; crossovers; interference; recombination; sex-specific

Mesh:

Year:  2019        PMID: 30670541      PMCID: PMC6404250          DOI: 10.1534/genetics.118.301838

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  55 in total

1.  A mechanical basis for chromosome function.

Authors:  Nancy Kleckner; Denise Zickler; Gareth H Jones; Job Dekker; Ruth Padmore; Jim Henle; John Hutchinson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-06       Impact factor: 11.205

Review 2.  Meiotic crossover patterns: obligatory crossover, interference and homeostasis in a single process.

Authors:  Shunxin Wang; Denise Zickler; Nancy Kleckner; Liangran Zhang
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

3.  Sex-specific recombination rates in zebrafish (Danio rerio).

Authors:  Amy Singer; Hodel Perlman; YiLin Yan; Charlene Walker; Graham Corley-Smith; Bruce Brandhorst; John Postlethwait
Journal:  Genetics       Date:  2002-02       Impact factor: 4.562

4.  The Saccharomyces cerevisiae MER3 gene, encoding a novel helicase-like protein, is required for crossover control in meiosis.

Authors:  T Nakagawa; H Ogawa
Journal:  EMBO J       Date:  1999-10-15       Impact factor: 11.598

5.  Genetic interference: don't stand so close to me.

Authors:  Luke E Berchowitz; Gregory P Copenhaver
Journal:  Curr Genomics       Date:  2010-04       Impact factor: 2.236

6.  Pairing and synapsis in wild type Arabidopsis thaliana.

Authors:  Eva López; Mónica Pradillo; Concepción Romero; Juan L Santos; Nieves Cuñado
Journal:  Chromosome Res       Date:  2008-05-08       Impact factor: 5.239

7.  Arabidopsis thaliana FANCD2 Promotes Meiotic Crossover Formation.

Authors:  Marie-Therese Kurzbauer; Mónica Pradillo; Claudia Kerzendorfer; Jason Sims; Rene Ladurner; Cecilia Oliver; Michael Peter Janisiw; Magdalena Mosiolek; Dieter Schweizer; Gregory P Copenhaver; Peter Schlögelhofer
Journal:  Plant Cell       Date:  2018-01-19       Impact factor: 11.277

8.  Nucleosomes and DNA methylation shape meiotic DSB frequency in Arabidopsis thaliana transposons and gene regulatory regions.

Authors:  Kyuha Choi; Xiaohui Zhao; Andrew J Tock; Christophe Lambing; Charles J Underwood; Thomas J Hardcastle; Heïdi Serra; Juhyun Kim; Hyun Seob Cho; Jaeil Kim; Piotr A Ziolkowski; Nataliya E Yelina; Ildoo Hwang; Robert A Martienssen; Ian R Henderson
Journal:  Genome Res       Date:  2018-03-12       Impact factor: 9.043

9.  The effect of temperature on the male and female recombination landscape of barley.

Authors:  Dylan Phillips; Glyn Jenkins; Malcolm Macaulay; Candida Nibau; Joanna Wnetrzak; Derek Fallding; Isabelle Colas; Helena Oakey; Robbie Waugh; Luke Ramsay
Journal:  New Phytol       Date:  2015-08-07       Impact factor: 10.151

10.  The Arabidopsis HEI10 is a new ZMM protein related to Zip3.

Authors:  Liudmila Chelysheva; Daniel Vezon; Aurélie Chambon; Ghislaine Gendrot; Lucie Pereira; Afef Lemhemdi; Nathalie Vrielynck; Sylvia Le Guin; Maria Novatchkova; Mathilde Grelon
Journal:  PLoS Genet       Date:  2012-07-26       Impact factor: 5.917

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  13 in total

Review 1.  Crossover Interference, Crossover Maturation, and Human Aneuploidy.

Authors:  Shunxin Wang; Yanlei Liu; Yongliang Shang; Binyuan Zhai; Xiao Yang; Nancy Kleckner; Liangran Zhang
Journal:  Bioessays       Date:  2019-08-19       Impact factor: 4.345

Review 2.  Crossover patterning in plants.

Authors:  Andrew Lloyd
Journal:  Plant Reprod       Date:  2022-07-14       Impact factor: 4.217

3.  Diversity and determinants of recombination landscapes in flowering plants.

Authors:  Thomas Brazier; Sylvain Glémin
Journal:  PLoS Genet       Date:  2022-08-30       Impact factor: 6.020

4.  The megabase-scale crossover landscape is largely independent of sequence divergence.

Authors:  Qichao Lian; Victor Solier; Birgit Walkemeier; Stéphanie Durand; Bruno Huettel; Korbinian Schneeberger; Raphael Mercier
Journal:  Nat Commun       Date:  2022-07-02       Impact factor: 17.694

5.  CDKG1 Is Required for Meiotic and Somatic Recombination Intermediate Processing in Arabidopsis.

Authors:  Candida Nibau; Andrew Lloyd; Despoina Dadarou; Alexander Betekhtin; Foteini Tsilimigka; Dylan W Phillips; John H Doonan
Journal:  Plant Cell       Date:  2020-02-10       Impact factor: 11.277

6.  Meiotic Double-Strand Break Processing and Crossover Patterning Are Regulated in a Sex-Specific Manner by BRCA1-BARD1 in Caenorhabditis elegans.

Authors:  Qianyan Li; Sara Hariri; JoAnne Engebrecht
Journal:  Genetics       Date:  2020-08-12       Impact factor: 4.562

7.  Recombination suppression in heterozygotes for a pericentric inversion induces the interchromosomal effect on crossovers in Arabidopsis.

Authors:  Pasquale Termolino; Matthieu Falque; Riccardo Aiese Cigliano; Gaetana Cremona; Rosa Paparo; Antoine Ederveen; Olivier C Martin; Federica M Consiglio; Clara Conicella
Journal:  Plant J       Date:  2019-10-07       Impact factor: 6.417

8.  The synaptonemal complex imposes crossover interference and heterochiasmy in Arabidopsis.

Authors:  Laia Capilla-Pérez; Stéphanie Durand; Aurélie Hurel; Qichao Lian; Aurélie Chambon; Christelle Taochy; Victor Solier; Mathilde Grelon; Raphael Mercier
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-23       Impact factor: 12.779

Review 9.  Crossover Interference: Shedding Light on the Evolution of Recombination.

Authors:  Sarah P Otto; Bret A Payseur
Journal:  Annu Rev Genet       Date:  2019-08-20       Impact factor: 16.830

10.  Divergence and Remarkable Diversity of the Y Chromosome in Guppies.

Authors:  Pedro Almeida; Benjamin A Sandkam; Jake Morris; Iulia Darolti; Felix Breden; Judith E Mank
Journal:  Mol Biol Evol       Date:  2021-01-23       Impact factor: 16.240

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