Literature DB >> 30662994

A modular approach for assembly of quantitative adverse outcome pathways.

Christy M Foran1, Taylor Rycroft1, Jeffrey Keisler2, Edward J Perkins1, Igor Linkov1, Natàlia Garcia-Reyero1.   

Abstract

The adverse outcome pathway (AOP) framework is a conceptual construct that mechanistically links molecular initiating events to adverse biological outcomes through a series of causal key events (KEs) that represent the perturbation of the biological system. Quantitative, predictive AOPs are necessary for screening emerging contaminants and potential substitutes to inform their prioritization for testing. In practice, they are not widely used because they can be costly to develop and validate. A modular approach for assembly of quantitative AOPs, based on existing knowledge, would allow for rapid development of biological pathway models to screen contaminants for potential hazards and prioritize them for subsequent testing and modeling. For each pair of KEs, a quantitative KE relationship (KER) can be derived as a response-response function or a conditional probability matrix describing the anticipated change in a KE based on the response of the prior KE. This transfer of response across KERs can be used to assemble a quantitative AOP. Here we demonstrate the use of proposed approach in two cases: inhibition of cytochrome P450 aromatase leading to reduced fecundity in fathead minnows and ionic glutamate receptor mediated excitotoxicity leading to memory impairment in rodents. The model created from these chains have value in characterizing the pathway and the potential or relative level of toxicological effect anticipated. This approach to simplistic, modular AOP models has wide applicability for rapid development of biological pathway models.

Entities:  

Keywords:  screening model; response function; aromatase inhibition; NMDA agonist

Year:  2019        PMID: 30662994     DOI: 10.14573/altex.1810181

Source DB:  PubMed          Journal:  ALTEX        ISSN: 1868-596X            Impact factor:   6.043


  10 in total

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2.  A cross-sector call to improve carcinogenicity risk assessment through use of genomic methodologies.

Authors:  Carole L Yauk; Alison H Harrill; Heidrun Ellinger-Ziegelbauer; Jan Willem van der Laan; Jonathan Moggs; Roland Froetschl; Frank Sistare; Syril Pettit
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Review 3.  Current Therapeutic Landscape and Safety Roadmap for Targeting the Aryl Hydrocarbon Receptor in Inflammatory Gastrointestinal Indications.

Authors:  Samantha C Faber; Tejas S Lahoti; Ewan R Taylor; Lauren Lewis; Jessica M Sapiro; Vicencia Toledo Sales; Yvonne P Dragan; Brandon D Jeffy
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4.  A Case Study on Integrating a New Key Event Into an Existing Adverse Outcome Pathway on Oxidative DNA Damage: Challenges and Approaches in a Data-Rich Area.

Authors:  Elizabeth Huliganga; Francesco Marchetti; Jason M O'Brien; Vinita Chauhan; Carole L Yauk
Journal:  Front Toxicol       Date:  2022-04-28

5.  Integrative Strategy of Testing Systems for Identification of Endocrine Disruptors Inducing Metabolic Disorders-An Introduction to the OBERON Project.

Authors:  Karine Audouze; Denis Sarigiannis; Paloma Alonso-Magdalena; Celine Brochot; Maribel Casas; Martine Vrijheid; Patrick J Babin; Spyros Karakitsios; Xavier Coumoul; Robert Barouki
Journal:  Int J Mol Sci       Date:  2020-04-23       Impact factor: 5.923

Review 6.  Quantitative adverse outcome pathway (qAOP) models for toxicity prediction.

Authors:  Nicoleta Spinu; Mark T D Cronin; Steven J Enoch; Judith C Madden; Andrew P Worth
Journal:  Arch Toxicol       Date:  2020-05-18       Impact factor: 5.153

7.  Mapping Mechanistic Pathways of Acute Oral Systemic Toxicity Using Chemical Structure and Bioactivity Measurements.

Authors:  Stephen W Edwards; Mark Nelms; Virginia K Hench; Jessica Ponder; Kristie Sullivan
Journal:  Front Toxicol       Date:  2022-03-07

8.  Towards a qAOP framework for predictive toxicology - Linking data to decisions.

Authors:  Alicia Paini; Ivana Campia; Mark T D Cronin; David Asturiol; Lidia Ceriani; Thomas E Exner; Wang Gao; Caroline Gomes; Johannes Kruisselbrink; Marvin Martens; M E Bette Meek; David Pamies; Julia Pletz; Stefan Scholz; Andreas Schüttler; Nicoleta Spînu; Daniel L Villeneuve; Clemens Wittwehr; Andrew Worth; Mirjam Luijten
Journal:  Comput Toxicol       Date:  2022-02

9.  From Qualitative to Quantitative AOP: A Case Study of Neurodegeneration.

Authors:  Dennis Sinitsyn; Natàlia Garcia-Reyero; Karen H Watanabe
Journal:  Front Toxicol       Date:  2022-03-30

10.  Toxicokinetic Modeling of Per- and Polyfluoroalkyl Substance Concentrations within Developing Zebrafish (Danio rerio) Populations.

Authors:  Ross M Warner; Lisa M Sweeney; Brett A Hayhurst; Michael L Mayo
Journal:  Environ Sci Technol       Date:  2022-09-02       Impact factor: 11.357

  10 in total

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