Literature DB >> 30659147

Reaction of O2 with a diiron protein generates a mixed-valent Fe2+/Fe3+ center and peroxide.

Justin M Bradley1, Dimitri A Svistunenko2, Jacob Pullin2, Natalie Hill1, Rhona K Stuart3, Brian Palenik3, Michael T Wilson2, Andrew M Hemmings1,4, Geoffrey R Moore1, Nick E Le Brun5.   

Abstract

The gene encoding the cyanobacterial ferritin SynFtn is up-regulated in response to copper stress. Here, we show that, while SynFtn does not interact directly with copper, it is highly unusual in several ways. First, its catalytic diiron ferroxidase center is unlike those of all other characterized prokaryotic ferritins and instead resembles an animal H-chain ferritin center. Second, as demonstrated by kinetic, spectroscopic, and high-resolution X-ray crystallographic data, reaction of O2 with the di-Fe2+ center results in a direct, one-electron oxidation to a mixed-valent Fe2+/Fe3+ form. Iron-O2 chemistry of this type is currently unknown among the growing family of proteins that bind a diiron site within a four α-helical bundle in general and ferritins in particular. The mixed-valent form, which slowly oxidized to the more usual di-Fe3+ form, is an intermediate that is continually generated during mineralization. Peroxide, rather than superoxide, is shown to be the product of O2 reduction, implying that ferroxidase centers function in pairs via long-range electron transfer through the protein resulting in reduction of O2 bound at only one of the centers. We show that electron transfer is mediated by the transient formation of a radical on Tyr40, which lies ∼4 Å from the diiron center. As well as demonstrating an expansion of the iron-O2 chemistry known to occur in nature, these data are also highly relevant to the question of whether all ferritins mineralize iron via a common mechanism, providing unequivocal proof that they do not.

Entities:  

Keywords:  diiron protein; electron transfer; ferritin; iron; tyrosyl radical

Mesh:

Substances:

Year:  2019        PMID: 30659147      PMCID: PMC6369749          DOI: 10.1073/pnas.1809913116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  46 in total

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Authors:  Andrew J Jasniewski; Lawrence Que
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Review 4.  Unity in the biochemistry of the iron-storage proteins ferritin and bacterioferritin.

Authors:  Kourosh Honarmand Ebrahimi; Peter-Leon Hagedoorn; Wilfred R Hagen
Journal:  Chem Rev       Date:  2014-11-24       Impact factor: 60.622

5.  Validation of metal-binding sites in macromolecular structures with the CheckMyMetal web server.

Authors:  Heping Zheng; Mahendra D Chordia; David R Cooper; Maksymilian Chruszcz; Peter Müller; George M Sheldrick; Wladek Minor
Journal:  Nat Protoc       Date:  2013-12-19       Impact factor: 13.491

6.  EPR study of the mixed-valent diiron sites in mouse and herpes simplex virus ribonucleotide reductases. Effect of the tyrosyl radical on structure and reactivity of the diferric center.

Authors:  R M Davydov; A Davydov; R Ingemarson; L Thelander; A Ehrenberg; A Gräslund
Journal:  Biochemistry       Date:  1997-07-29       Impact factor: 3.162

7.  The high-resolution X-ray crystallographic structure of the ferritin (EcFtnA) of Escherichia coli; comparison with human H ferritin (HuHF) and the structures of the Fe(3+) and Zn(2+) derivatives.

Authors:  T J Stillman; P D Hempstead; P J Artymiuk; S C Andrews; A J Hudson; A Treffry; J R Guest; P M Harrison
Journal:  J Mol Biol       Date:  2001-03-23       Impact factor: 5.469

8.  Electron transfer associated with oxygen activation in the B2 protein of ribonucleotide reductase from Escherichia coli.

Authors:  T E Elgren; J B Lynch; C Juarez-Garcia; E Münck; B M Sjöberg; L Que
Journal:  J Biol Chem       Date:  1991-10-15       Impact factor: 5.157

9.  Direct spectroscopic and kinetic evidence for the involvement of a peroxodiferric intermediate during the ferroxidase reaction in fast ferritin mineralization.

Authors:  A S Pereira; W Small; C Krebs; P Tavares; D E Edmondson; E C Theil; B H Huynh
Journal:  Biochemistry       Date:  1998-07-14       Impact factor: 3.162

10.  An introduction to data reduction: space-group determination, scaling and intensity statistics.

Authors:  Philip R Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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  6 in total

Review 1.  Bacterial iron detoxification at the molecular level.

Authors:  Justin M Bradley; Dimitri A Svistunenko; Michael T Wilson; Andrew M Hemmings; Geoffrey R Moore; Nick E Le Brun
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2.  Flavin-mediated reductive iron mobilization from frog M and Mycobacterial ferritins: impact of their size, charge and reactivities with NADH/O2.

Authors:  Prashanth Kumar Koochana; Abhinav Mohanty; Akankshika Parida; Narmada Behera; Pabitra Mohan Behera; Anshuman Dixit; Rabindra K Behera
Journal:  J Biol Inorg Chem       Date:  2021-02-17       Impact factor: 3.358

Review 3.  Bacterial iron detoxification at the molecular level.

Authors:  Justin M Bradley; Dimitry A Svistunenko; Michael T Wilson; Andrew M Hemmings; Geoffrey R Moore; Nick E Le Brun
Journal:  J Biol Chem       Date:  2020-12-18       Impact factor: 5.157

4.  Key carboxylate residues for iron transit through the prokaryotic ferritin SynFtn.

Authors:  Justin M Bradley; Joshua Fair; Andrew M Hemmings; Nick E Le Brun
Journal:  Microbiology (Reading)       Date:  2021-11       Impact factor: 2.777

5.  Microbial Musings - November 2021.

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Journal:  Microbiology (Reading)       Date:  2022-01       Impact factor: 2.777

6.  Second Coordination Sphere Effects on the Mechanistic Pathways for Dioxygen Activation by a Ferritin: Involvement of a Tyr Radical and the Identification of a Cation Binding Site.

Authors:  Chieh-Chih George Yeh; Thirakorn Mokkawes; Justin M Bradley; Nick E Le Brun; Sam P de Visser
Journal:  Chembiochem       Date:  2022-05-23       Impact factor: 3.461

  6 in total

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