Literature DB >> 30658971

To Fix or Not To Fix: Controls on Free-Living Nitrogen Fixation in the Rhizosphere.

Darian N Smercina1, Sarah E Evans2, Maren L Friesen3, Lisa K Tiemann4.   

Abstract

Free-living nitrogen fixation (FLNF) in the rhizosphere, or N fixation by heterotrophic bacteria living on/near root surfaces, is ubiquitous and a significant source of N in some terrestrial systems. FLNF is also of interest in crop production as an alternative to chemical fertilizer, potentially reducing production costs and ameliorating negative environmental impacts of fertilizer N additions. Despite this interest, a mechanistic understanding of controls (e.g., carbon, oxygen, nitrogen, and nutrient availability) on FLNF in the rhizosphere is lacking but necessary. FLNF is distinct from and occurs under more diverse and dynamic conditions than symbiotic N fixation; therefore, predicting FLNF rates and understanding controls on FLNF has proven difficult. This has led to large gaps in our understanding of FLNF, and studies aimed at identifying controls on FLNF are needed. Here, we provide a mechanistic overview of FLNF, including how various controls may influence FLNF in the rhizosphere in comparison with symbiotic N fixation occurring in plant nodules where environmental conditions are moderated by the plant. We apply this knowledge to a real-world example, the bioenergy crop switchgrass (Panicum virgatum), to provide context of how FLNF may function in a managed system. We also highlight future challenges to assessing FLNF and understanding how FLNF functions in the environment and significantly contributes to plant N availability and productivity.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  diazotrophs; environmental controls; free-living nitrogen fixation; rhizosphere; rhizosphere-inhabiting microbes

Mesh:

Year:  2019        PMID: 30658971      PMCID: PMC6414387          DOI: 10.1128/AEM.02546-18

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  18 in total

1.  Microbiological properties of Beejamrit, an ancient Indian traditional knowledge, uncover a dynamic plant beneficial microbial network.

Authors:  Shibasis Mukherjee; Suchana Sain; Md Nasim Ali; Rupak Goswami; Argha Chakraborty; Krishnendu Ray; Rantim Bhattacharjee; Bhubaneswar Pradhan; Natesan Ravisankar; Gautam Chatterjee
Journal:  World J Microbiol Biotechnol       Date:  2022-05-16       Impact factor: 3.312

2.  Bulk and Spatially Resolved Extracellular Metabolome of Free-Living Nitrogen Fixation.

Authors:  Darian N Smercina; Young-Mo Kim; Mary S Lipton; Dusan Velickovic; Kirsten S Hofmockel
Journal:  Appl Environ Microbiol       Date:  2022-06-02       Impact factor: 5.005

3.  Nitrogen fixation: a poorly understood process along the freshwater-marine continuum.

Authors:  Amy M Marcarelli; Robinson W Fulweiler; J Thad Scott
Journal:  Limnol Oceanogr Lett       Date:  2021-10-29

Review 4.  Novel technologies for emission reduction complement conservation agriculture to achieve negative emissions from row-crop production.

Authors:  Daniel L Northrup; Bruno Basso; Michael Q Wang; Cristine L S Morgan; Philip N Benfey
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-13       Impact factor: 11.205

5.  Engineering Posttranslational Regulation of Glutamine Synthetase for Controllable Ammonia Production in the Plant Symbiont Azospirillum brasilense.

Authors:  Tim Schnabel; Elizabeth Sattely
Journal:  Appl Environ Microbiol       Date:  2021-06-25       Impact factor: 4.792

6.  Elevated Atmospheric CO2 and Nitrogen Fertilization Affect the Abundance and Community Structure of Rice Root-Associated Nitrogen-Fixing Bacteria.

Authors:  Jumei Liu; Jingjing Han; Chunwu Zhu; Weiwei Cao; Ying Luo; Meng Zhang; Shaohua Zhang; Zhongjun Jia; Ruihong Yu; Ji Zhao; Zhihua Bao
Journal:  Front Microbiol       Date:  2021-04-21       Impact factor: 5.640

7.  Grape Cultivar Features Differentiate the Grape Rhizosphere Microbiota.

Authors:  Lijun Bao; Bo Sun; Yingxue Wei; Nan Xu; Shiwei Zhang; Likun Gu; Zhihui Bai
Journal:  Plants (Basel)       Date:  2022-04-20

8.  Elucidation of the Genome of Bradyrhizobium sp. Strain USDA 3456, a Historic Agricultural Diazotroph from Cowpea (Vigna unguiculata).

Authors:  Richard Allen White; Jeffrey S Norman; Emily E Mclachlan; Joseph P Dunham; Aaron Garoutte; Maren L Friesen
Journal:  Microbiol Resour Announc       Date:  2019-08-15

9.  Nitrogen Fertilization and Native C4 Grass Species Alter Abundance, Activity, and Diversity of Soil Diazotrophic Communities.

Authors:  Jialin Hu; Jonathan D Richwine; Patrick D Keyser; Lidong Li; Fei Yao; Sindhu Jagadamma; Jennifer M DeBruyn
Journal:  Front Microbiol       Date:  2021-07-08       Impact factor: 5.640

10.  Biological nitrogen fixation in maize: optimizing nitrogenase expression in a root-associated diazotroph.

Authors:  Sarah E Bloch; Rosemary Clark; Shayin S Gottlieb; L Kent Wood; Neal Shah; San-Ming Mak; James G Lorigan; Jenny Johnson; Austin G Davis-Richardson; Lorena Williams; Megan McKellar; Dominic Soriano; Max Petersen; Alana Horton; Olivia Smith; Leslie Wu; Emily Tung; Richard Broglie; Alvin Tamsir; Karsten Temme
Journal:  J Exp Bot       Date:  2020-07-25       Impact factor: 6.992

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