Literature DB >> 30655896

Comprehensive bioinformatics analysis of lncRNAs in gastric cancer.

Dongdong Qi1, Qiang Wang2, Meiqing Wu3, Xiong Zhang4.   

Abstract

Long non-coding RNAs (lncRNAs) have been generally considered to serve important roles in various types of cancer, including gastric cancer. However, a comprehensive understanding of lncRNAs in gastric cancer requires further study. The present study performed an in-depth study revealed 50 differently expressed lncRNAs. The changed cellular pathways and biological process in gastric cancer were determined. To further confirm the functions of the differently expressed lncRNAs, co-expression networks were constructed between the lncRNAs and mRNA; this lead to the identification of 6 modules, which participated in various cellular pathways. In addition, 2 lncRNAs were identified which were associated with clinical outcome. The biological analysis and experimental evidence suggested that LINC00982 inhibited, while LL22NC03-N14H11.1 promoted the proliferation of gastric cancer cells. These lncRNAs may be considered as potential prognostic factor in gastric cancer.

Entities:  

Keywords:  Gene Set Enrichment Analysis; LINC00982; LL22NC03-N14H11.1; gastric cancer; lncRNA; proliferation; survival analysis; weighted gene co-expression network analysis

Year:  2018        PMID: 30655896      PMCID: PMC6313033          DOI: 10.3892/ol.2018.9707

Source DB:  PubMed          Journal:  Oncol Lett        ISSN: 1792-1074            Impact factor:   2.967


  5 in total

Review 1.  Gastric cancer: a comprehensive review of current and future treatment strategies.

Authors:  Rachel E Sexton; Mohammed Najeeb Al Hallak; Maria Diab; Asfar S Azmi
Journal:  Cancer Metastasis Rev       Date:  2020-09-07       Impact factor: 9.264

2.  Overexpression of long non-coding RNA LINC00982 suppresses cell proliferation and tumor growth of papillary thyroid carcinoma through PI3K-ATK signaling pathway.

Authors:  Debin Xu; Jichun Yu; Shimin Zhuang; Shuyong Zhang; Zhengdong Hong; Chunlei Yuan
Journal:  Biosci Rep       Date:  2019-07-12       Impact factor: 3.840

3.  Identifying of biomarkers associated with gastric cancer based on 11 topological analysis methods of CytoHubba.

Authors:  Hua Ma; Zhihui He; Jing Chen; Xu Zhang; Pingping Song
Journal:  Sci Rep       Date:  2021-01-14       Impact factor: 4.379

4.  Silencing of long non-coding RNA XIST represses gastric cancer progression through blocking NFκB pathway via inhibiting HNF4A-mediated transcription of EPHA1.

Authors:  Ping Li; Liuhua Wang; Pengfei Li; Fangyong Hu; Yi Cao; Dong Tang; Gang Ye; Hongbo Li; Daorong Wang
Journal:  Cancer Gene Ther       Date:  2020-11-16       Impact factor: 5.987

5.  Long Non-Coding RNA CRYBG3 Promotes Lung Cancer Metastasis via Activating the eEF1A1/MDM2/MTBP Axis.

Authors:  Anqing Wu; Jiaxin Tang; Ziyang Guo; Yingchu Dai; Jing Nie; Wentao Hu; Ningang Liu; Caiyong Ye; Shihong Li; Hailong Pei; Guangming Zhou
Journal:  Int J Mol Sci       Date:  2021-03-22       Impact factor: 5.923

  5 in total

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