| Literature DB >> 30652828 |
Xindie Zhou1,2, Lifeng Jiang3, Yi Zhang2, Junjie Zhang2, Dong Zhou1, Lidong Wu3, Yong Huang2, Nanwei Xu1.
Abstract
Aggrecanase-2 (ADAMTS5) gene is responsible for aggrecan degradation that may contribute to cartilage destruction in a mouse osteoarthritis (OA) model. We aimed to investigate the effects of ADAMTS5 gene polymorphisms on OA risk in a Chinese population. A total of 300 OA patients and 300 controls were recruited and their genotypes for ADAMTS5 gene rs226794 and rs2830585 polymorphisms were determined using a custom-by-design 48-Plex single nucleotide polymorphism Scan™ kit. ADAMTS5-associated genes were identified by co-expression analysis and their functions were investigated by Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses. Bioinformatics analysis showed that ADAMTS5 was significantly related to the components, structural constituent, and organization of the extracellular matrix. The rs2830585 polymorphism, but not rs226794 polymorphism, was significantly associated with an increased risk of knee OA. Stratified analysis further confirmed this significant association in patients at age ≥55 years. In conclusion, the ADAMTS5 rs2830585 polymorphism may be involved in the development of knee OA by destroying the extracellular matrix, but this finding should be further confirmed by larger studies.Entities:
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Year: 2019 PMID: 30652828 PMCID: PMC6328970 DOI: 10.1590/1414-431X20188109
Source DB: PubMed Journal: Braz J Med Biol Res ISSN: 0100-879X Impact factor: 2.590
Figure 1Protein interaction network of ADAMTS5 co-expression gene.
Figure 2Bar plot of representative Gene Ontology analysis of ADAMTS5 co-expression gene. CC: extracellular matrix (ECM) component; MF: ECM structural constituent; BP: ECM organization.
Figure 3Linkage disequilibrium of the 9 SNPs in ADAMTS5 gene.
Functional single nucleotide polymorphisms (SNP) selection from the 9 tag SNPs.
| SNP | Chr pos (hg38) | Ref/Alt | dbSNP func annot | Amino acid change | Amino acid | Prediction (homologs) | Score (homologs) | Median info (homologs) |
|---|---|---|---|---|---|---|---|---|
| Rs226794 | 21:26930036 | G/A | missense | L692P | Leu | Damaging | 0.02 | 3.22 |
| Pro | Tolerated | 1 | 3.22 | |||||
| Rs7281968 | 21:26930239 | T/G | intronic | |||||
| Rs2830584 | 21:26930587 | G/A | intronic | |||||
| Rs151056 | 21:26931204 | G/A | intronic | |||||
| Rs386817552 | 21:26932519 | N/A | N/A | |||||
| Rs229045 | 21:26932555 | G/A | intronic | |||||
| Rs2830585 | 21:26932893 | C/T | missense | R614H | Arg | Tolerated | 1 | 3.21 |
| His | Damaging | 0 | 3.21 | |||||
| Rs2830586 | 21:26931158 | T/G | intronic | |||||
| Rs752315154 | 21:26933328 | T/A | intronic |
Chr pos: chromosome position.
Patient demographics and risk factors for knee osteoarthritis.
| Variable | Cases (n=300) | Controls (n=300) | P |
|---|---|---|---|
| Age (years) | 58.2±9.1 | 59.0±9.2 | 0.329 |
| Sex | |||
| Male | 85 (28.3%) | 89 (29.7%) | 0.719 |
| Female | 215 (71.7%) | 211 (70.3%) | |
| Body mass index | 26.5±3.3 | 24.1±3.5 | <0.001 |
| CRP, mg/L | 24.8±14.1 | ||
| ESR, mm/h | 21.4±12.6 | ||
| VAS | 8.1±2.7 | ||
| Lequesne index | 14.2±2.5 | ||
| Kellgren-Lawrence grading | |||
| 1 | 18 (6.1%) | ||
| 2 | 128 (42.6%) | ||
| 3 | 98 (32.7%) | ||
| 4 | 56 (18.6%) |
Data are reported as number and percentage or mean±SD (t-test or chi-squared) test) CRP: C-reactive protein; ESR: erythrocyte sedimentation rate; VAS: visual analogue scale.
Logistic regression analysis of associations between ADAMTS5 gene polymorphisms and risk of osteoarthritis.
| Genotype | Casesa (n=300) | Controlsa (n=300) | Hardy-Weinberg equilibrium | OR (95%CI) | P | Adjusted OR (95%CI)b | P | ||
|---|---|---|---|---|---|---|---|---|---|
| n | % | n | % | ||||||
| Rs226794 G/A | 0.998 | ||||||||
| GG | 203 | 67.7 | 182 | 60.7 | 1.00 | ||||
| GA | 86 | 28.7 | 101 | 33.7 | 0.76 (0.54,1.08) | 0.131 | 0.78 (0.54,1.13) | 0.191 | |
| AA | 9 | 3.0 | 14 | 4.7 | 0.58 (0.24,1.36) | 0.210 | 0.64 (0.26,1.59) | 0.335 | |
| GA+AA | 95 | 31.7 | 115 | 38.4 | 0.74 (0.53,1.04) | 0.081 | 0.76 (0.53,1.09) | 0.140 | |
| GG+GA | 289 | 96.4 | 283 | 94.4 | 1.00 | ||||
| AA | 9 | 3.0 | 14 | 4.7 | 0.63 (0.27,1.48) | 0.288 | 0.69 (0.28,1.71) | 0.426 | |
| G allele | 492 | 82.0 | 465 | 77.5 | 1.00 | ||||
| A allele | 104 | 17.3 | 129 | 21.5 | 0.76 (0.57,1.02) | 0.064 | |||
| Rs2830585 C/T | 0.961 | ||||||||
| CC | 145 | 48.3 | 172 | 57.3 | 1.00 | ||||
| CT | 126 | 42.0 | 109 | 36.3 | 1.37 (0.98,1.92) | 0.068 | 1.41 (0.99,2.02) | 0.060 | |
| TT | 28 | 9.3 | 17 | 5.7 |
| 0.041 |
| 0.037 | |
| CT+TT | 154 | 51.3 | 126 | 42.0 |
| 0.024 |
| 0.021 | |
| CC+CT | 273 | 90.3 | 281 | 93.6 | 1.00 | ||||
| TT | 28 | 9.3 | 17 | 5.7 | 1.71 (0.91,3.19) | 0.093 | 1.79 (0.92,3.47) | 0.087 | |
| C allele | 416 | 69.3 | 453 | 75.5 | 1.00 | ||||
| T allele | 182 | 30.3 | 143 | 23.8 |
| 0.013 | |||
Genotyping was successful in 298 cases and 297 controls for rs226794, and 299 cases and 298 controls for rs2830585. bAdjusted for sex, age, and body mass index. Bold values are statistically significant (P<0.05).
Estimated haplotype number and relative frequencies for the two ADAMTS5 variants (rs226794 and rs2830585).
| Haplotype | OA | Control | OR (95%CI) | P |
|---|---|---|---|---|
| GC | 263 (0.438) | 265 (0.442) | 0.99 (0.81,1.22) | 0.942 |
| AC | 82 (0.137) | 109 (0.182) | 0.75 (0.55,1.02) | 0.070 |
| GT | 149 (0.248) | 118 (0.197) | 1.26 (0.97,1.65) | 0.087 |
OA: osteoarthritis. Chi-squared test.
Stratified analyses between ADAMTS5 gene polymorphisms and the risk of osteoarthritis.
| Variable |
| TT | TT+CT | TT | ||
|---|---|---|---|---|---|---|
| CC | TC | TT | ||||
| Sex | ||||||
| Male | 49/47 | 30/39 | 5/3 | 2.20 (0.78-6.23); 0.138 | 1.21 (0.66-2.21); 0.542 | 2.14 (0.80-5.72); 0.131 |
| Female | 96/125 | 96/70 | 23/14 | 1.81 (0.76-4.32); 0.182 | 1.60 (0.95-2.69); 0.078 | 2.61 (1.08-6.33); 0.415 |
| Age (years) | ||||||
| <55 | 46/52 | 48/35 | 10/5 | 1.07 (0.41-2.82); 0.890 | 1.09 (0.61-1.94); 0.766 | 1.02 (0.41-2.51); 0.972 |
| ≥55 | 99/120 | 78/74 | 18/12 | 3.34 (1.30-8.56); | 1.80 (1.05-3.11); | 2.61 (1.08-6.33); |
Bold values are statistically significant (P<0.05, chi-squared test).
Comparison of studied data according to ADAMTS5 genotypes in all osteoarthritis (OA) cases.
|
| OA (n=300) | P | ||
|---|---|---|---|---|
| CC (n=145) | AG (n=126) | GG (n=28) | ||
| BMI (kg/m2, mean±SD) | 26.65±3.15 | 26.40±3.57 | 26.56±3.06 | 0.823 |
| ESR (mm/h, mean±SD) | 21.26±11.04 | 21.51±14.23 | 21.76±13.11 | 0.725 |
| CRP (mg/L, mean±SD) | 25.73±14.45 | 24.45±14.05 | 22.63±11.56 | 0.504 |
| VAS (mean±SD) | 8.12±2.60 | 8.04±2.60 | 8.50±3.29 | 0.711 |
| Lequesne index (mean±SD) | 13.96±2.49 | 14.37±2.54 | 14.43±2.51 | 0.342 |
| K-L grading (III+IV / I+II, n (%)) | 75 (51.7%) / 70 (48.3%) | 65 (51.6%) / 61 (48.4%) | 13 (46.4%) / 15 (53.6%) | 0.870 |
BMI: body mass index; ESR: erythrocyte sedimentation rate; CRP: C-reactive protein; VAS: visual analogue scale; K-L: Kellgren-Lawrence. The t-test and chi-squared test were used for statistical analyses. Genotyping was successful in 299 OA patients for rs2830585.
Figure 4Histogram of serum ADAMTS5 levels in patients with OA. Data are reported as means±SD (t-test).