Literature DB >> 30652576

Monitoring of Technology Adoption Using Web Content Mining of Location Information and Geographic Information Systems: A Case Study of Digital Breast Tomosynthesis.

Tracy Onega1, Dharmanshu Kamra1, Jennifer Alford-Teaster1, Saeed Hassanpour1.   

Abstract

PURPOSE: To our knowledge, integration of Web content mining of publicly available addresses with a geographic information system (GIS) has not been applied to the timely monitoring of medical technology adoption. Here, we explore the diffusion of a new breast imaging technology, digital breast tomosynthesis (DBT).
METHODS: We used natural language processing and machine learning to extract DBT facility location information using a set of potential sites for the New England region of the United States via a Google search application program interface. We assessed the accuracy of the algorithm using a validated set of publicly available addresses of locations that provide DBT from the DBT technology vendor, Hologic. We quantified precision, recall, and F1 score, aiming for an F1 score of ≥ 95% as the desirable performance. By reverse geocoding on the basis of the results of the Google Maps application program interface, we derived a spatial data set for use in an ArcGIS environment. Within the GIS, a host of spatiotemporal analyses and geovisualization techniques are possible.
RESULTS: We developed a semiautomated system that integrated DBT location information into a GIS that was feasible and of reasonable quality. Initial accuracy of the algorithm was poor using only a search term list for information retrieval (precision, 35%; recall, 44%; F1 score, 39%), but performance dramatically improved by leveraging natural language processing and simple machine learning techniques to isolate single, valid instances of DBT location information (precision, 92%; recall, 96%; F1 score, 94%). Reverse geocoding yielded reliable geographic coordinates for easy implementation into a GIS for mapping and planned monitoring.
CONCLUSION: Our novel approach can be applicable to technologies beyond DBT, which may inform equitable access over time and space.

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Mesh:

Year:  2018        PMID: 30652576      PMCID: PMC6874011          DOI: 10.1200/CCI.17.00150

Source DB:  PubMed          Journal:  JCO Clin Cancer Inform        ISSN: 2473-4276


  4 in total

1.  Infodemiology and infoveillance: framework for an emerging set of public health informatics methods to analyze search, communication and publication behavior on the Internet.

Authors:  Gunther Eysenbach
Journal:  J Med Internet Res       Date:  2009-03-27       Impact factor: 5.428

2.  Digital disease detection--harnessing the Web for public health surveillance.

Authors:  John S Brownstein; Clark C Freifeld; Lawrence C Madoff
Journal:  N Engl J Med       Date:  2009-05-07       Impact factor: 91.245

3.  Why Health Services Research Needs Geoinformatics: Rationale and Case Example.

Authors:  Tracy Onega; Jennifer Alford-Teaster; Steven Andrews; Craig Ganoe; Mike Perez; King David; Xun Shi
Journal:  J Health Med Inform       Date:  2014-12

4.  A semantic-based method for extracting concept definitions from scientific publications: evaluation in the autism phenotype domain.

Authors:  Saeed Hassanpour; Martin J O'Connor; Amar K Das
Journal:  J Biomed Semantics       Date:  2013-08-12
  4 in total

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