Literature DB >> 30646726

Machine learning model for non-equilibrium structures and energies of simple molecules.

E Iype1, S Urolagin2.   

Abstract

Predicting molecular properties using a Machine Learning (ML) method is gaining interest among research as it offers quantum chemical accuracy at molecular mechanics speed. This prediction is performed by training an ML model using a set of reference data [mostly Density Functional Theory (DFT)] and then using it to predict properties. In this work, kernel based ML models are trained (using Bag of Bonds as well as many body tensor representation) against datasets containing non-equilibrium structures of six molecules (water, methane, ethane, propane, butane, and pentane) to predict their atomization energies and to perform a Metropolis Monte Carlo (MMC) run with simulated annealing to optimize molecular structures. The optimized structures and energies of the molecules are found to be comparable with DFT optimized structures, energies, and forces. Thus, this method offers the possibility to use a trained ML model to perform a classical simulation such as MMC without using any force field, thereby improving the accuracy of the simulation at low computational cost.

Entities:  

Year:  2019        PMID: 30646726     DOI: 10.1063/1.5054968

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

Review 1.  Deep Learning for Deep Chemistry: Optimizing the Prediction of Chemical Patterns.

Authors:  Tânia F G G Cova; Alberto A C C Pais
Journal:  Front Chem       Date:  2019-11-26       Impact factor: 5.221

2.  Dataset's chemical diversity limits the generalizability of machine learning predictions.

Authors:  Marta Glavatskikh; Jules Leguy; Gilles Hunault; Thomas Cauchy; Benoit Da Mota
Journal:  J Cheminform       Date:  2019-11-12       Impact factor: 5.514

  2 in total

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