| Literature DB >> 30642583 |
Tamiko Brown-Joseph1, Paulina Rajko-Nenow2, Hayley Hicks2, Nikita Sahadeo3, Lara E Harrup4, Christine V Carrington3, Carrie Batten2, Christopher A L Oura5.
Abstract
Epizootic hemorrhagic disease virus (EHDV) is an economically important virus that can cause severe clinical disease in deer and to a lesser extent cattle. This study set out to determine and characterize which EHDV serotypes were circulating in Trinidad. Serum and whole blood samples were collected monthly for six months from a cohort of cattle imported to Trinidad from the USA. Results revealed that all the cattle seroconverted to EHDV within six months of their arrival, with EHDV RNA being detected in the samples just prior to antibodies, as expected. Serotyping assays revealed that a single serotype (EHDV-6) was circulating in the cattle. Sequencing of the surface viral protein (VP2) of EHDV-6, followed by phylogenetic analysis, revealed that the Trinidad EHDV-6 strain was closely related to EHDV-6 viruses found in Guadeloupe (2010), Martinique (2010) and USA (2006), with 96-97.2% nucleotide identity. The Trinidad EHDV-6 VP-2 shared 97.2% identity with the Australian EHDV-6 prototype strain, classifying it within the eastern topotype clade. Bayesian coalescent analysis support Australia as the most probable source for the EHDV-6 VP2 sequences in the Americas and Caribbean region and suggests that the they diverged from the Australian prototype strain around 1966 (95% HPD 1941-1979).Entities:
Keywords: BTV co-circulation; Culicoides; EHDV evolution rate; EHDV serotypes; Trinidad; cattle
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Year: 2018 PMID: 30642583 PMCID: PMC6340808 DOI: 10.1016/j.vetmic.2018.12.009
Source DB: PubMed Journal: Vet Microbiol ISSN: 0378-1135 Impact factor: 3.293
Fig. 1A: Percentage of cattle positive for antibodies (Ab) and RNA for both EHDV and BTV time of arrival in Trinidad (month 0) to the last month of blood collection (month 6).(BTV Ct values from their were taken from Brown-Joseph et al., 2017). B: Ct values measured by EHDV group-specific rRT-PCRs on blood samples taken from the first month of virus detection to the last month of blood collection (month 6). The dotted line shows the overall trending increase in Ct values for animal 874 during the five-month period.
Fig. 2Maximum Likelihood (ML) tree estimated from 52 EHDV segment-2 sequences using PhyML with GTR + G4+I nucleotide substitution model. Taxon labels include year of isolation, accession number/ sequence ID and country of isolation. Clades defining eastern (e) and western (w) topotypes of EHDV serotypes are indicated by black bars. The Trinidad EHDV-6 sequence derived during this study is highlighted in red. Bootstrap support >80% is indicated at relevant nodes. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article).
Fig. 3Maximum Clade Credibility (MCC) tree estimated from 17 EHDV-6 VP2 sequences (2916 bp). Taxon labels include accession number, country of isolation and year of isolation. Posterior probabilities (clade credibilities) >80% are indicated to the right of the relevant node. Terminal branches of the tree are coloured according to the country from which the sequence at the sequence was derived. Internal branches are coloured according to the most probable location of their parental nodes. The location state probability and estimated tMRCA for nodes basal to the clade containing the Caribbean and American strains is indicated as a percentage to the left of those nodes.