Literature DB >> 30641128

Phylogenetic and expression analysis of histone acetyltransferases in Brachypodium distachyon.

Shenglong Tan1, Lifen Gao2, Tiantian Li3, Lihong Chen4.   

Abstract

Histone acetylation is an important post-translational modification in eukaryotes and is regulated by two antagonistic enzymes, namely histone acetyltransferase (HAT) and histone deacetylase (HDAC). However, little has been done on the HAT superfamily in Brachypodium distachyon (B. distachyon), a new model plant of Poaceae. In this study, eight HATs were identified from B. distachyon and classified into four major families. Subcellular localization analysis showed that a majority of BdHATs were predominantly localized in the nucleus. Syntenic and phylogenetic analysis indicated there may be two common ancestral CREB-binding protein (p300/CBP, HAC) genes prior to the separation of monocots and dicots. Expression analysis revealed that the potential roles of BdHATs in B. distachyon development and responses to four abiotic stresses. Protein-protein network analysis identified some potential interactive genes with BdHATs. Thus, our results will provide solid basis for further study the function of HAT genes in B. distachyon and other monocot plants.
Copyright © 2019 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Abiotic stress; Brachypodium distachyon; Evolution; Expression profile; Histone acetylation; Interaction network

Mesh:

Substances:

Year:  2019        PMID: 30641128     DOI: 10.1016/j.ygeno.2019.01.008

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  2 in total

1.  Genome-wide promoter analysis, homology modeling and protein interaction network of Dehydration Responsive Element Binding (DREB) gene family in Solanum tuberosum.

Authors:  Qurat-Ul Ain-Ali; Nida Mushtaq; Rabia Amir; Alvina Gul; Muhammad Tahir; Faiza Munir
Journal:  PLoS One       Date:  2021-12-16       Impact factor: 3.240

Review 2.  Histone Acetylation Changes in Plant Response to Drought Stress.

Authors:  Shuang Li; Xu He; Yuan Gao; Chenguang Zhou; Vincent L Chiang; Wei Li
Journal:  Genes (Basel)       Date:  2021-09-13       Impact factor: 4.096

  2 in total

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