Literature DB >> 30639291

Integrative analysis of blood metabolomics and PET brain neuroimaging data for Parkinson's disease.

Enrico Glaab1, Jean-Pierre Trezzi2, Andrea Greuel3, Christian Jäger4, Zdenka Hodak4, Alexander Drzezga5, Lars Timmermann3, Marc Tittgemeyer6, Nico Jean Diederich7, Carsten Eggers3.   

Abstract

BACKGROUND: The diagnosis of Parkinson's disease (PD) often remains a clinical challenge. Molecular neuroimaging can facilitate the diagnostic process. The diagnostic potential of metabolomic signatures has recently been recognized.
METHODS: We investigated whether the joint data analysis of blood metabolomics and PET imaging by machine learning provides enhanced diagnostic discrimination and gives further pathophysiological insights. Blood plasma samples were collected from 60 PD patients and 15 age- and gender-matched healthy controls. We determined metabolomic profiles by gas chromatography coupled to mass spectrometry (GC-MS). In the same cohort and at the same time we performed FDOPA PET in 44 patients and 14 controls and FDG PET in 51 patients and 16 controls. 18 PD patients were available for a follow-up exam after one year. Both data sets were analysed by two machine learning approaches, applying either linear support vector machines or random forests within a leave-one-out cross-validation scheme and computing receiver operating characteristic (ROC) curves.
RESULTS: In the metabolomics data, the baseline comparison between cases and controls as well as the follow-up assessment of patients pointed to metabolite changes associated with oxidative stress and inflammation. For the FDOPA and FDG PET data, the diagnostic predictive performance (DPP) in the ROC analyses was highest when combining imaging features with metabolomics data (ROC AUC for best FDOPA + metabolomics model: 0.98; AUC for best FDG + metabolomics model: 0.91). DPP was lower when using only PET attributes or only metabolomics signatures.
CONCLUSION: Integrating blood metabolomics data combined with PET data considerably enhances the diagnostic discrimination power. Metabolomic signatures also indicate interesting disease-inherent changes in cellular processes, including oxidative stress response and inflammation.
Copyright © 2019 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Machine learning; Metabolomics; Neuroimaging; PET; Parkinson's disease

Mesh:

Year:  2019        PMID: 30639291     DOI: 10.1016/j.nbd.2019.01.003

Source DB:  PubMed          Journal:  Neurobiol Dis        ISSN: 0969-9961            Impact factor:   5.996


  7 in total

Review 1.  Lipids: biomarkers of healthy aging.

Authors:  I Almeida; S Magalhães; A Nunes
Journal:  Biogerontology       Date:  2021-04-10       Impact factor: 4.277

Review 2.  Artificial intelligence for molecular neuroimaging.

Authors:  Amanda J Boyle; Vincent C Gaudet; Sandra E Black; Neil Vasdev; Pedro Rosa-Neto; Katherine A Zukotynski
Journal:  Ann Transl Med       Date:  2021-05

Review 3.  Flexible Electronics for Monitoring in vivo Electrophysiology and Metabolite Signals.

Authors:  Hye Kyu Choi; Jin-Ho Lee; Taek Lee; Sang-Nam Lee; Jeong-Woo Choi
Journal:  Front Chem       Date:  2020-11-19       Impact factor: 5.221

4.  The default mode network and cognition in Parkinson's disease: A multimodal resting-state network approach.

Authors:  Marina C Ruppert; Andrea Greuel; Julia Freigang; Masoud Tahmasian; Franziska Maier; Jochen Hammes; Thilo van Eimeren; Lars Timmermann; Marc Tittgemeyer; Alexander Drzezga; Carsten Eggers
Journal:  Hum Brain Mapp       Date:  2021-02-27       Impact factor: 5.038

5.  Severe and Regionally Widespread Increases in Tissue Urea in the Human Brain Represent a Novel Finding of Pathogenic Potential in Parkinson's Disease Dementia.

Authors:  Melissa Scholefield; Stephanie J Church; Jingshu Xu; Stefano Patassini; Federico Roncaroli; Nigel M Hooper; Richard D Unwin; Garth J S Cooper
Journal:  Front Mol Neurosci       Date:  2021-10-22       Impact factor: 5.639

6.  Multi-omics signature of brain amyloid deposition in asymptomatic individuals at-risk for Alzheimer's disease: The INSIGHT-preAD study.

Authors:  Laura Xicota; Farid Ichou; François-Xavier Lejeune; Benoit Colsch; Arthur Tenenhaus; Inka Leroy; Gaëlle Fontaine; Marie Lhomme; Hugo Bertin; Marie-Odile Habert; Stéphane Epelbaum; Bruno Dubois; Fanny Mochel; Marie-Claude Potier
Journal:  EBioMedicine       Date:  2019-09-03       Impact factor: 8.143

Review 7.  Mining imaging and clinical data with machine learning approaches for the diagnosis and early detection of Parkinson's disease.

Authors:  Jing Zhang
Journal:  NPJ Parkinsons Dis       Date:  2022-01-21
  7 in total

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