Literature DB >> 30638952

Identification of miR-375 as a potential prognostic biomarker for esophageal squamous cell cancer: A bioinformatics analysis based on TCGA and meta-analysis.

He-San Luo1, De-Hua Wu2.   

Abstract

Accumulating evidence has demonstrated that aberrantly expressed miRNAs in cancer tissues regulated various cellular processes related to carcinogenesis. The present study aimed to identify the differentially expressed miRNAs between esophageal squamous cell cancer (ESCC) and adjacent normal esophageal tissue (ANET). In our present study, we identified 129 differentially expressed miRNAs between ESCC and ANET by analyzing high-throughput miRNA data downloaded from TCGA database. After investigating the prognostic value of the 129 differential expressed miRNAs, eight miRNAs were found to be associated with prognosis of patients with ESCC. The clinical significance and bio-function of miR-375 was further examined. We performed Gene Set Enrichment Analysis (GSEA) to identify the top three gene sets that significantly altered between the patients with miR-375 low expression and high expression. In order to explore the mechanism of the development and progression of ESCC, the role of miR-375 in ESCC and its four candidate target genes was examined. At last, we performed a meta-analysis to verify the prognostic value of miR-375 in ESCC. In conclusion, our findings suggest that miR-375 serves as a promising independent prognostic factor for ESCC and function as a tumor suppressor.
Copyright © 2019 Elsevier GmbH. All rights reserved.

Entities:  

Keywords:  Bioinformatics analysis; Esophageal squamous cell cancer; TCGA; miR-375

Mesh:

Substances:

Year:  2019        PMID: 30638952     DOI: 10.1016/j.prp.2019.01.009

Source DB:  PubMed          Journal:  Pathol Res Pract        ISSN: 0344-0338            Impact factor:   3.250


  6 in total

1.  Upregulation of Centromere Proteins as Potential Biomarkers for Esophageal Squamous Cell Carcinoma Diagnosis and Prognosis.

Authors:  Xiao Wang; Minshan Lai; Yue Wang; Ruihuan Chai; Nan Li; Ling Ou; Kai Zheng; Jieling Li; Guifeng Xu; Shaoqi Wang; Yun Dong; Shaoxiang Wang
Journal:  Biomed Res Int       Date:  2022-04-20       Impact factor: 3.246

Review 2.  Liquid Biopsy in Squamous Cell Carcinoma of the Esophagus and of the Head and Neck.

Authors:  Razvan Iacob; Matei Mandea; Speranta Iacob; Catalina Pietrosanu; Doru Paul; Razvan Hainarosie; Cristian Gheorghe
Journal:  Front Med (Lausanne)       Date:  2022-04-29

3.  A novel circ_0000654/miR-375/E2F3 ceRNA network in esophageal squamous cell carcinoma.

Authors:  Chunyu Luo; Xiaowei Zhao; Yuan Wang; Yanqiu Li; Tuo Wang; Shumin Li
Journal:  Thorac Cancer       Date:  2022-07-05       Impact factor: 3.223

4.  Genome-wide analysis of lncRNAs, miRNAs, and mRNAs forming a prognostic scoring system in esophageal squamous cell carcinoma.

Authors:  Xiaobo Shi; You Li; Yuchen Sun; Xu Zhao; Xuanzi Sun; Tuotuo Gong; Zhinan Liang; Yuan Ma; Xiaozhi Zhang
Journal:  PeerJ       Date:  2020-02-10       Impact factor: 2.984

5.  Integrated analysis of genome-wide miRNAs and targeted gene expression in esophageal squamous cell carcinoma (ESCC) and relation to prognosis.

Authors:  Howard Yang; Hua Su; Nan Hu; Chaoyu Wang; Lemin Wang; Carol Giffen; Alisa M Goldstein; Maxwell P Lee; Philip R Taylor
Journal:  BMC Cancer       Date:  2020-05-06       Impact factor: 4.430

Review 6.  Emerging Role of Non-Coding RNAs in Esophageal Squamous Cell Carcinoma.

Authors:  Qingqing Feng; Hongli Zhang; Denglin Yao; Wei-Dong Chen; Yan-Dong Wang
Journal:  Int J Mol Sci       Date:  2019-12-30       Impact factor: 5.923

  6 in total

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