Literature DB >> 30637363

Informatics Approaches to Address New Challenges in the Classification of Lymphoid Malignancies.

Jacob Jordan1, Jordan S Goldstein1, David L Jaye1, Metin Gurcan1, Christopher R Flowers1, Lee A D Cooper1.   

Abstract

Purpose: Lymphoid malignancies are remarkably heterogeneous, with variations in outcomes and clinical, biologic, and histologic presentation complicating classification according to the World Health Organization guidelines. Incorrect classification of lymphoid neoplasms can result in suboptimal therapeutic strategies for individual patients and confound the interpretation of clinical trials involving personalized, class-based treatments. This review discusses the potential role of pathology informatics in improving the classification accuracy and objectivity for lymphoid malignancies. Design: We identified peer-reviewed publications examining pathology informatics approaches for the classification of lymphoid malignancies, reviewed developments in the lymphoma classification systems, and summarized computational methods for pathologic assessment that can impact practice.
Results: Computer-assisted pathology image analysis algorithms in lymphoma most commonly have been applied to follicular lymphoma to address biologic heterogeneity and subjectivity in the process of classification.
Conclusion: Objective methods are available to assist pathologists in lymphoma classification and grading, and have been demonstrated to provide measurable benefits in specific contexts. Future validation and extension of these approaches will require datasets that link high resolution pathology images available for image analysis algorithms with clinical variables and follow up outcomes.

Entities:  

Mesh:

Year:  2018        PMID: 30637363      PMCID: PMC6324571          DOI: 10.1200/CCI.17.00039

Source DB:  PubMed          Journal:  JCO Clin Cancer Inform        ISSN: 2473-4276


  28 in total

1.  Systematic analysis of breast cancer morphology uncovers stromal features associated with survival.

Authors:  Andrew H Beck; Ankur R Sangoi; Samuel Leung; Robert J Marinelli; Torsten O Nielsen; Marc J van de Vijver; Robert B West; Matt van de Rijn; Daphne Koller
Journal:  Sci Transl Med       Date:  2011-11-09       Impact factor: 17.956

Review 2.  Improving outcomes for patients with diffuse large B-cell lymphoma.

Authors:  Christopher R Flowers; Rajni Sinha; Julie M Vose
Journal:  CA Cancer J Clin       Date:  2010-10-28       Impact factor: 508.702

3.  Computer-aided detection of centroblasts for follicular lymphoma grading using adaptive likelihood-based cell segmentation.

Authors:  Olcay Sertel; Gerard Lozanski; Arwa Shana'ah; Metin N Gurcan
Journal:  IEEE Trans Biomed Eng       Date:  2010-06-28       Impact factor: 4.538

4.  A general framework for the segmentation of follicular lymphoma virtual slides.

Authors:  Myriam Oger; Philippe Belhomme; Metin N Gurcan
Journal:  Comput Med Imaging Graph       Date:  2012-06-18       Impact factor: 4.790

5.  Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling.

Authors:  A A Alizadeh; M B Eisen; R E Davis; C Ma; I S Lossos; A Rosenwald; J C Boldrick; H Sabet; T Tran; X Yu; J I Powell; L Yang; G E Marti; T Moore; J Hudson; L Lu; D B Lewis; R Tibshirani; G Sherlock; W C Chan; T C Greiner; D D Weisenburger; J O Armitage; R Warnke; R Levy; W Wilson; M R Grever; J C Byrd; D Botstein; P O Brown; L M Staudt
Journal:  Nature       Date:  2000-02-03       Impact factor: 49.962

6.  The Genetic Basis of Hepatosplenic T-cell Lymphoma.

Authors:  Matthew McKinney; Andrea B Moffitt; Philippe Gaulard; Marion Travert; Laurence De Leval; Alina Nicolae; Mark Raffeld; Elaine S Jaffe; Stefania Pittaluga; Liqiang Xi; Tayla Heavican; Javeed Iqbal; Karim Belhadj; Marie Helene Delfau-Larue; Virginie Fataccioli; Magdalena B Czader; Izidore S Lossos; Jennifer R Chapman-Fredricks; Kristy L Richards; Yuri Fedoriw; Sarah L Ondrejka; Eric D Hsi; Lawrence Low; Dennis Weisenburger; Wing C Chan; Neha Mehta-Shah; Steven Horwitz; Leon Bernal-Mizrachi; Christopher R Flowers; Anne W Beaven; Mayur Parihar; Lucile Baseggio; Marie Parrens; Anne Moreau; Pierre Sujobert; Monika Pilichowska; Andrew M Evens; Amy Chadburn; Rex K H Au-Yeung; Gopesh Srivastava; William W L Choi; John R Goodlad; Igor Aurer; Sandra Basic-Kinda; Randy D Gascoyne; Nicholas S Davis; Guojie Li; Jenny Zhang; Deepthi Rajagopalan; Anupama Reddy; Cassandra Love; Shawn Levy; Yuan Zhuang; Jyotishka Datta; David B Dunson; Sandeep S Davé
Journal:  Cancer Discov       Date:  2017-01-25       Impact factor: 39.397

7.  Computer aided analysis of prostate histopathology images Gleason grading especially for Gleason score 7.

Authors:  Jian Ren; Evita T Sadimin; Daihou Wang; Jonathan I Epstein; David J Foran; Xin Qi
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015

8.  Impact of induction regimen and stem cell transplantation on outcomes in double-hit lymphoma: a multicenter retrospective analysis.

Authors:  Adam M Petrich; Mitul Gandhi; Borko Jovanovic; Jorge J Castillo; Saurabh Rajguru; David T Yang; Khushboo A Shah; Jeremy D Whyman; Frederick Lansigan; Francisco J Hernandez-Ilizaliturri; Lisa X Lee; Stefan K Barta; Shruthi Melinamani; Reem Karmali; Camille Adeimy; Scott Smith; Neil Dalal; Chadi Nabhan; David Peace; Julie Vose; Andrew M Evens; Namrata Shah; Timothy S Fenske; Andrew D Zelenetz; Daniel J Landsburg; Christina Howlett; Anthony Mato; Michael Jaglal; Julio C Chavez; Judy P Tsai; Nishitha Reddy; Shaoying Li; Caitlin Handler; Christopher R Flowers; Jonathon B Cohen; Kristie A Blum; Kevin Song; Haowei Linda Sun; Oliver Press; Ryan Cassaday; Jesse Jaso; L Jeffrey Medeiros; Aliyah R Sohani; Jeremy S Abramson
Journal:  Blood       Date:  2014-08-26       Impact factor: 22.113

Review 9.  Framing of research question using the PICOT format in randomised controlled trials of venous ulcer disease: a protocol for a systematic survey of the literature.

Authors:  Luciana P F Abbade; Mei Wang; Kamath Sriganesh; Lawrence Mbuagbaw; Lehana Thabane
Journal:  BMJ Open       Date:  2016-11-11       Impact factor: 2.692

10.  Identifying survival associated morphological features of triple negative breast cancer using multiple datasets.

Authors:  Chao Wang; Thierry Pécot; Debra L Zynger; Raghu Machiraju; Charles L Shapiro; Kun Huang
Journal:  J Am Med Inform Assoc       Date:  2013-04-12       Impact factor: 4.497

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  1 in total

Review 1.  Remaining challenges in predicting patient outcomes for diffuse large B-cell lymphoma.

Authors:  R Andrew Harkins; Andres Chang; Sharvil P Patel; Michelle J Lee; Jordan S Goldstein; Selin Merdan; Christopher R Flowers; Jean L Koff
Journal:  Expert Rev Hematol       Date:  2019-09-12       Impact factor: 2.929

  1 in total

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