Literature DB >> 30636123

Silicon Liquid Structure and Crystal Nucleation from Ab Initio Deep Metadynamics.

Luigi Bonati1,2, Michele Parrinello2,3.   

Abstract

Studying the crystallization process of silicon is a challenging task since empirical potentials are not able to reproduce well the properties of both a semiconducting solid and metallic liquid. On the other hand, nucleation is a rare event that occurs in much longer timescales than those achievable by ab initio molecular dynamics. To address this problem, we train a deep neural network potential based on a set of data generated by metadynamics simulations using a classical potential. We show how this is an effective way to collect all the relevant data for the process of interest. In order to efficiently drive the crystallization process, we introduce a new collective variable based on the Debye structure factor. We are able to encode the long-range order information in a local variable which is better suited to describe the nucleation dynamics. The reference energies are then calculated using the strongly constrained and appropriately normed (SCAN) exchange-correlation functional, which is able to get a better description of the bonding complexity of the Si phase diagram. Finally, we recover the free energy surface with a density functional theory accuracy, and we compute the thermodynamics properties near the melting point, obtaining a good agreement with experimental data. In addition, we study the early stages of the crystallization process, unveiling features of the nucleation mechanism.

Entities:  

Year:  2018        PMID: 30636123     DOI: 10.1103/PhysRevLett.121.265701

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  9 in total

1.  Neural networks-based variationally enhanced sampling.

Authors:  Luigi Bonati; Yue-Yu Zhang; Michele Parrinello
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-15       Impact factor: 11.205

2.  Deep learning the slow modes for rare events sampling.

Authors:  Luigi Bonati; GiovanniMaria Piccini; Michele Parrinello
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-02       Impact factor: 11.205

3.  Homogeneous ice nucleation in an ab initio machine-learning model of water.

Authors:  Pablo M Piaggi; Jack Weis; Athanassios Z Panagiotopoulos; Pablo G Debenedetti; Roberto Car
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-08       Impact factor: 12.779

4.  Machine Learning Force Fields.

Authors:  Oliver T Unke; Stefan Chmiela; Huziel E Sauceda; Michael Gastegger; Igor Poltavsky; Kristof T Schütt; Alexandre Tkatchenko; Klaus-Robert Müller
Journal:  Chem Rev       Date:  2021-03-11       Impact factor: 60.622

5.  Quantifying Chemical Structure and Machine-Learned Atomic Energies in Amorphous and Liquid Silicon.

Authors:  Noam Bernstein; Bishal Bhattarai; Gábor Csányi; David A Drabold; Stephen R Elliott; Volker L Deringer
Journal:  Angew Chem Int Ed Engl       Date:  2019-04-17       Impact factor: 15.336

6.  Machine learning-accelerated quantum mechanics-based atomistic simulations for industrial applications.

Authors:  Tobias Morawietz; Nongnuch Artrith
Journal:  J Comput Aided Mol Des       Date:  2020-10-09       Impact factor: 3.686

7.  Free energy of proton transfer at the water-TiO2 interface from ab initio deep potential molecular dynamics.

Authors:  Marcos F Calegari Andrade; Hsin-Yu Ko; Linfeng Zhang; Roberto Car; Annabella Selloni
Journal:  Chem Sci       Date:  2020-01-28       Impact factor: 9.825

8.  Ab initio phase diagram and nucleation of gallium.

Authors:  Haiyang Niu; Luigi Bonati; Pablo M Piaggi; Michele Parrinello
Journal:  Nat Commun       Date:  2020-05-27       Impact factor: 14.919

9.  Self-consistent determination of long-range electrostatics in neural network potentials.

Authors:  Ang Gao; Richard C Remsing
Journal:  Nat Commun       Date:  2022-03-23       Impact factor: 14.919

  9 in total

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