Literature DB >> 30628539

Validation of a clinical pharmacogenetic model to predict methotrexate nonresponse in rheumatoid arthritis patients.

Frank Eektimmerman1,2, Cornelia F Allaart3, Johanna M Hazes4, Moenira B Madhar1, Alfons A den Broeder5, Jaap Fransen5, Jesse J Swen1,2, Henk-Jan Guchelaar1,2.   

Abstract

AIM: To study the performance of a clinical pharmacogenetic model for the prediction of nonresponse in rheumatoid arthritis (RA) patients treated with methotrexate (MTX) in combination with other synthetic or biologic disease-modifying anti-rheumatic drugs . This prediction model includes gender, smoking status, rheumatoid factor positivity and four genetic variants in AMPD1 (rs17602729), ATIC (rs2372536), ITPA (rs1127354) and MTHFD1 (rs17850560).
METHODS: A total of 314 RA patients from three Dutch studies were retrospectively included. Eligible patients were adults diagnosed with RA and had a treatment duration with MTX and follow-up for at least two study evaluation visits. Prediction model risk scores at the first and second evaluation were calculated and compared with the actual nonresponse (disease activity score >2.4). Regression and receiver operating characteristic curve analyses of the prediction model were performed. Also, the sensitivity, specificity and the positive and negative predictive values (PPV and NPV) were determined.
RESULTS: The receiver operating characteristic area under the curve was 75% at first and 70% after second evaluation. At the second evaluation, prediction nonresponse had a sensitivity of 67% (CI: 54-78%), specificity of 69% (CI: 60-77%), PPV of 52% (CI: 45-60%) and NPV of 80% (CI: 73-85%).
CONCLUSIONS: This study demonstrates that the clinical pharmacogenetic model has an inadequate performance for the prediction of nonresponse to MTX in RA patients treated with combination therapies.

Entities:  

Keywords:  effectiveness of therapy; methotrexate; pharmacogenetic models; prediction model; rheumatoid arthritis

Year:  2019        PMID: 30628539     DOI: 10.2217/pgs-2018-0144

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  4 in total

1.  Identification of Metabolic Biomarkers in Relation to Methotrexate Response in Early Rheumatoid Arthritis.

Authors:  Helen R Gosselt; Ittai B Muller; Gerrit Jansen; Michel van Weeghel; Frédéric M Vaz; Johanna M W Hazes; Sandra G Heil; Robert de Jonge
Journal:  J Pers Med       Date:  2020-12-10

Review 2.  Pharmacomicrobiology of Methotrexate in Rheumatoid Arthritis: Gut Microbiome as Predictor of Therapeutic Response.

Authors:  Huanhuan Yan; Rui Su; Hongwei Xue; Chong Gao; Xiaofeng Li; Caihong Wang
Journal:  Front Immunol       Date:  2021-12-16       Impact factor: 7.561

Review 3.  Pharmacomicrobiomics in inflammatory arthritis: gut microbiome as modulator of therapeutic response.

Authors:  Jose U Scher; Renuka R Nayak; Carles Ubeda; Peter J Turnbaugh; Steven B Abramson
Journal:  Nat Rev Rheumatol       Date:  2020-03-10       Impact factor: 32.286

4.  Validation of a Prognostic Multivariable Prediction Model for Insufficient Clinical Response to Methotrexate in Early Rheumatoid Arthritis and Its Clinical Application in Evidencio.

Authors:  Helen R Gosselt; Maxime M A Verhoeven; Maurits C F J de Rotte; Saskia M F Pluijm; Ittai B Muller; Gerrit Jansen; Janneke Tekstra; Maja Bulatović-Ćalasan; Sandra G Heil; Floris P J G Lafeber; Johanna M W Hazes; Robert de Jonge
Journal:  Rheumatol Ther       Date:  2020-09-14
  4 in total

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