Literature DB >> 30623212

Diversity and Composition of Pelagic Prokaryotic and Protist Communities in a Thin Arctic Sea-Ice Regime.

António Gaspar G de Sousa1,2, Maria Paola Tomasino3, Pedro Duarte4, Mar Fernández-Méndez4, Philipp Assmy4, Hugo Ribeiro3, Jaroslaw Surkont5, Ricardo B Leite5, José B Pereira-Leal5, Luís Torgo6,7, Catarina Magalhães3,8.   

Abstract

One of the most prominent manifestations of climate change is the changing Arctic sea-ice regime with a reduction in the summer sea-ice extent and a shift from thicker, perennial multiyear ice towards thinner, first-year ice. These changes in the physical environment are likely to impact microbial communities, a key component of Arctic marine food webs and biogeochemical cycles. During the Norwegian young sea ICE expedition (N-ICE2015) north of Svalbard, seawater samples were collected at the surface (5 m), subsurface (20 or 50 m), and mesopelagic (250 m) depths on 9 March, 27 April, and 16 June 2015. In addition, several physical and biogeochemical data were recorded to contextualize the collected microbial communities. Through the massively parallel sequencing of the small subunit ribosomal RNA amplicon and metagenomic data, this work allows studying the Arctic's microbial community structure during the late winter to early summer transition. Results showed that, at compositional level, Alpha- (30.7%) and Gammaproteobacteria (28.6%) are the most frequent taxa across the prokaryotic N-ICE2015 collection, and also the most phylogenetically diverse. Winter to early summer trends were quite evident since there was a high relative abundance of thaumarchaeotes in the under-ice water column in late winter while this group was nearly absent during early summer. Moreover, the emergence of Flavobacteria and the SAR92 clade in early summer might be associated with the degradation of a spring bloom of Phaeocystis. High relative abundance of hydrocarbonoclastic bacteria, particularly Alcanivorax (54.3%) and Marinobacter (6.3%), was also found. Richness showed different patterns along the depth gradient for prokaryotic (highest at mesopelagic depth) and protistan communities (higher at subsurface depths). The microbial N-ICE2015 collection analyzed in the present study provides comprehensive new knowledge about the pelagic microbiota below drifting Arctic sea-ice. The higher microbial diversity found in late winter/early spring communities reinforces the need to continue with further studies to properly characterize the winter microbial communities under the pack-ice.

Entities:  

Keywords:  Arctic Ocean; Diversity; Microbiota; Prokaryotes; Protists; SSU rRNA amplicon; Sea ice; Structure

Mesh:

Year:  2019        PMID: 30623212     DOI: 10.1007/s00248-018-01314-2

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  7 in total

1.  Exploration of the Types of Rarity in the Arctic Ocean from the Perspective of Multiple Methodologies.

Authors:  Francisco Pascoal; Rodrigo Costa; Philipp Assmy; Pedro Duarte; Catarina Magalhães
Journal:  Microb Ecol       Date:  2021-08-17       Impact factor: 4.552

2.  Depth Profile of Nitrifying Archaeal and Bacterial Communities in the Remote Oligotrophic Waters of the North Pacific.

Authors:  Miguel Semedo; Eva Lopes; Mafalda S Baptista; Ainhoa Oller-Ruiz; Javier Gilabert; Maria Paola Tomasino; Catarina Magalhães
Journal:  Front Microbiol       Date:  2021-02-23       Impact factor: 5.640

3.  Secondary metabolite biosynthetic diversity in Arctic Ocean metagenomes.

Authors:  Adriana Rego; Antonio Fernandez-Guerra; Pedro Duarte; Philipp Assmy; Pedro N Leão; Catarina Magalhães
Journal:  Microb Genom       Date:  2021-12

4.  Contrasting Community Composition and Co-Occurrence Relationships of the Active Pico-Sized Haptophytes in the Surface and Subsurface Chlorophyll Maximum Layers of the Arctic Ocean in Summer.

Authors:  Ping Sun; Yuyu Liao; Ying Wang; Eun-Jin Yang; Nianzhi Jiao; Youngju Lee; Jinyoung Jung; Kyoung-Ho Cho; Jong-Kuk Moon; Dapeng Xu
Journal:  Microorganisms       Date:  2022-01-23

5.  Diversity and Selection of Surface Marine Microbiomes in the Atlantic-Influenced Arctic.

Authors:  Nerea J Aalto; Hannah D Schweitzer; Stina Krsmanovic; Karley Campbell; Hans C Bernstein
Journal:  Front Microbiol       Date:  2022-07-14       Impact factor: 6.064

6.  A Winter-to-Summer Transition of Bacterial and Archaeal Communities in Arctic Sea Ice.

Authors:  Stefan Thiele; Julia E Storesund; Mar Fernández-Méndez; Philipp Assmy; Lise Øvreås
Journal:  Microorganisms       Date:  2022-08-10

7.  Dumpster diving for diatom plastid 16S rRNA genes.

Authors:  Krista L Bonfantine; Stacey M Trevathan-Tackett; Ty G Matthews; Ana Neckovic; Han Ming Gan
Journal:  PeerJ       Date:  2021-07-01       Impact factor: 2.984

  7 in total

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