Literature DB >> 30617056

Single-Cell Applications of Next-Generation Sequencing.

Naishitha Anaparthy1, Yu-Jui Ho2, Luciano Martelotto3, Molly Hammell2, James Hicks4.   

Abstract

The single cell is considered the basic unit of biology, and the pursuit of understanding how heterogeneous populations of cells can functionally coexist in tissues, organisms, microbial ecosystems, and even cancer, makes them the subject of intense study. Next-generation sequencing (NGS) of RNA and DNA has opened a new frontier of (single)-cell biology. Hundreds to millions of cells now can be assayed in parallel, providing the molecular profile of each cell in its milieu inexpensively and in a manner that can be analyzed mathematically. The goal of this article is to provide a high-level overview of single-cell sequencing for the nonexpert and show how its applications are influencing both basic and applied clinical studies in embryology, developmental genetics, and cancer.
Copyright © 2019 Cold Spring Harbor Laboratory Press; all rights reserved.

Entities:  

Year:  2019        PMID: 30617056     DOI: 10.1101/cshperspect.a026898

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Med        ISSN: 2157-1422            Impact factor:   6.915


  5 in total

Review 1.  Insights from Studies of White Adipose Tissue Using Single-Cell Approaches.

Authors:  Niklas Mejhert; Mikael Rydén
Journal:  Handb Exp Pharmacol       Date:  2022

Review 2.  Smart-RRBS for single-cell methylome and transcriptome analysis.

Authors:  Hongcang Gu; Ayush T Raman; Xiaoxue Wang; Federico Gaiti; Ronan Chaligne; Arman W Mohammad; Aleksandra Arczewska; Zachary D Smith; Dan A Landau; Martin J Aryee; Alexander Meissner; Andreas Gnirke
Journal:  Nat Protoc       Date:  2021-07-09       Impact factor: 13.491

3.  Failure of Glial Cell-Line Derived Neurotrophic Factor (GDNF) in Clinical Trials Orchestrated By Reduced NR4A2 (NURR1) Transcription Factor in Parkinson's Disease. A Systematic Review.

Authors:  Piniel Alphayo Kambey; Kouminin Kanwore; Abiola Abdulrahman Ayanlaja; Iqra Nadeem; YinZhen Du; Wokuheleza Buberwa; WenYa Liu; Dianshuai Gao
Journal:  Front Aging Neurosci       Date:  2021-02-24       Impact factor: 5.750

4.  The role of serum amyloid A1 in the adipogenic differentiation of human adipose-derived stem cells basing on single-cell RNA sequencing analysis.

Authors:  Rongmei Qu; Kai He; Yuchao Yang; Tingyu Fan; Bing Sun; Asmat Ullah Khan; Wenhua Huang; Jun Ouyang; Xinghua Pan; Jingxing Dai
Journal:  Stem Cell Res Ther       Date:  2022-05-07       Impact factor: 8.079

5.  Ligand-Receptor Interactions Elucidate Sex-Specific Pathways in the Trajectory From Primordial Germ Cells to Gonia During Human Development.

Authors:  Arend W Overeem; Yolanda W Chang; Jeroen Spruit; Celine M Roelse; Susana M Chuva De Sousa Lopes
Journal:  Front Cell Dev Biol       Date:  2021-06-18
  5 in total

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